Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 AC091607.1-201ENST00000490318 1060 ntBASIC11.54□□□□□ -0.56
SCXQ7RTU7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 AL160237.2-201ENST00000556165 472 ntBASIC11.54□□□□□ -0.56
SCXQ7RTU7 AC008687.5-201ENST00000593746 558 ntBASIC11.54□□□□□ -0.56
SCXQ7RTU7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 AC008764.6-201ENST00000595909 2069 ntBASIC11.54□□□□□ -0.56
SCXQ7RTU7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 AC126763.1-201ENST00000552015 2118 ntBASIC11.53□□□□□ -0.56
SCXQ7RTU7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 KRT16P4-201ENST00000453883 522 ntBASIC11.53□□□□□ -0.56
SCXQ7RTU7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 AP002469.2-201ENST00000531724 424 ntBASIC11.53□□□□□ -0.56
SCXQ7RTU7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 AC104692.2-201ENST00000603054 253 ntBASIC11.53□□□□□ -0.56
SCXQ7RTU7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SCXQ7RTU7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SCXQ7RTU7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms