Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
LCA10Q71F78 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC9.41□□□□□ -0.9
LCA10Q71F78 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
LCA10Q71F78 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 AL513523.2-202ENST00000427283 2040 ntBASIC9.41□□□□□ -0.9
LCA10Q71F78 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC9.41□□□□□ -0.9
LCA10Q71F78 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
LCA10Q71F78 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LCA10Q71F78 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
LCA10Q71F78 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
LCA10Q71F78 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
LCA10Q71F78 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
LCA10Q71F78 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.4□□□□□ -0.9
LCA10Q71F78 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
LCA10Q71F78 AC006449.5-201ENST00000610658 2098 ntBASIC9.4□□□□□ -0.9
LCA10Q71F78 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC9.4□□□□□ -0.9
LCA10Q71F78 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC9.4□□□□□ -0.9
LCA10Q71F78 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
LCA10Q71F78 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
LCA10Q71F78 SLC29A4P1-201ENST00000398760 971 ntBASIC9.4□□□□□ -0.9
LCA10Q71F78 CROCCP5-201ENST00000436658 830 ntBASIC9.4□□□□□ -0.9
LCA10Q71F78 AC006970.2-201ENST00000450065 779 ntBASIC9.4□□□□□ -0.9
LCA10Q71F78 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC9.4□□□□□ -0.9
LCA10Q71F78 GATS-209ENST00000454084 1030 ntTSL 3 BASIC9.4□□□□□ -0.9
LCA10Q71F78 AC083906.2-201ENST00000511578 360 ntBASIC9.4□□□□□ -0.9
LCA10Q71F78 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
LCA10Q71F78 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC9.4□□□□□ -0.9
LCA10Q71F78 IKBKGP1-201ENST00000612193 1073 ntBASIC9.4□□□□□ -0.9
LCA10Q71F78 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC9.4□□□□□ -0.9
LCA10Q71F78 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 AC083906.6-201ENST00000641366 219 ntBASIC9.4□□□□□ -0.9
LCA10Q71F78 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
LCA10Q71F78 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LCA10Q71F78 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC9.4□□□□□ -0.9
LCA10Q71F78 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC9.4□□□□□ -0.9
LCA10Q71F78 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
LCA10Q71F78 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
LCA10Q71F78 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
LCA10Q71F78 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LCA10Q71F78 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LCA10Q71F78 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
LCA10Q71F78 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LCA10Q71F78 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
LCA10Q71F78 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
LCA10Q71F78 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 AC106881.1-201ENST00000605849 3329 ntBASIC9.39□□□□□ -0.91
LCA10Q71F78 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
LCA10Q71F78 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
LCA10Q71F78 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 AC026748.1-201ENST00000624349 3251 ntBASIC9.39□□□□□ -0.91
LCA10Q71F78 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC9.39□□□□□ -0.91
LCA10Q71F78 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms