Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
CCDC149Q6ZUS6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC149Q6ZUS6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC149Q6ZUS6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC149Q6ZUS6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC149Q6ZUS6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC149Q6ZUS6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC149Q6ZUS6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC149Q6ZUS6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 BCRP1-201ENST00000444246 691 ntBASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 AC068137.2-201ENST00000605408 478 ntBASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 AC093512.1-201ENST00000617969 520 ntBASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 HTR7P1-202ENST00000624664 4411 ntBASIC18.16■□□□□ 0.5
CCDC149Q6ZUS6 REXO1L11P-201ENST00000620964 1927 ntBASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 FAM185BP-201ENST00000443595 716 ntBASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 AL096865.1-201ENST00000606796 927 ntBASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC149Q6ZUS6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
CCDC149Q6ZUS6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC149Q6ZUS6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC149Q6ZUS6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CCDC149Q6ZUS6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 AC004461.1-201ENST00000412461 403 ntBASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 AC025678.2-201ENST00000562061 970 ntBASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 AC239800.4-201ENST00000603712 296 ntBASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 AC092902.6-201ENST00000641783 218 ntBASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC149Q6ZUS6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms