Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 POLD2P1-201ENST00000511220 997 ntBASIC20.58■□□□□ 0.89
CTR9Q6PD62 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTR9Q6PD62 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTR9Q6PD62 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTR9Q6PD62 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CTR9Q6PD62 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CTR9Q6PD62 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.58■□□□□ 0.88
CTR9Q6PD62 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTR9Q6PD62 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTR9Q6PD62 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.88
CTR9Q6PD62 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTR9Q6PD62 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTR9Q6PD62 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CTR9Q6PD62 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTR9Q6PD62 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CTR9Q6PD62 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTR9Q6PD62 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTR9Q6PD62 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTR9Q6PD62 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTR9Q6PD62 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTR9Q6PD62 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTR9Q6PD62 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTR9Q6PD62 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTR9Q6PD62 IGHV3-65-201ENST00000523210 341 ntBASIC20.57■□□□□ 0.88
CTR9Q6PD62 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTR9Q6PD62 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 AC008667.4-201ENST00000607370 168 ntBASIC20.57■□□□□ 0.88
CTR9Q6PD62 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CTR9Q6PD62 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTR9Q6PD62 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.56■□□□□ 0.88
CTR9Q6PD62 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.56■□□□□ 0.88
CTR9Q6PD62 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTR9Q6PD62 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTR9Q6PD62 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CTR9Q6PD62 MIR940-201ENST00000401276 94 ntBASIC20.56■□□□□ 0.88
CTR9Q6PD62 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTR9Q6PD62 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTR9Q6PD62 AC108751.1-201ENST00000490852 363 ntBASIC20.56■□□□□ 0.88
CTR9Q6PD62 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CTR9Q6PD62 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTR9Q6PD62 AC140113.2-201ENST00000604370 208 ntBASIC20.56■□□□□ 0.88
CTR9Q6PD62 AL805961.1-202ENST00000641562 540 ntBASIC20.56■□□□□ 0.88
CTR9Q6PD62 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.56■□□□□ 0.88
CTR9Q6PD62 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTR9Q6PD62 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CTR9Q6PD62 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTR9Q6PD62 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTR9Q6PD62 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTR9Q6PD62 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CTR9Q6PD62 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTR9Q6PD62 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTR9Q6PD62 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTR9Q6PD62 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTR9Q6PD62 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTR9Q6PD62 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTR9Q6PD62 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTR9Q6PD62 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTR9Q6PD62 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTR9Q6PD62 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.55■□□□□ 0.88
CTR9Q6PD62 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTR9Q6PD62 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms