Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 MKNK2P1-201ENST00000437526 628 ntBASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 AL139327.4-201ENST00000612362 153 ntBASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC62Q6P9F0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 LINC01451-201ENST00000623792 534 ntBASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 AC007613.1-201ENST00000572811 2597 ntBASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 BCAR1-209ENST00000546196 1340 ntBASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC62Q6P9F0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 AL078644.1-201ENST00000609881 752 ntBASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC62Q6P9F0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms