Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FAM78BQ5VT40 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.83□□□□□ -0.19
FAM78BQ5VT40 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
FAM78BQ5VT40 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
FAM78BQ5VT40 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
FAM78BQ5VT40 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
FAM78BQ5VT40 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.83□□□□□ -0.19
FAM78BQ5VT40 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 SLC25A1P2-201ENST00000430693 912 ntBASIC13.83□□□□□ -0.2
FAM78BQ5VT40 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 CCR12P-201ENST00000446203 998 ntBASIC13.83□□□□□ -0.2
FAM78BQ5VT40 TSPY17P-201ENST00000450329 467 ntBASIC13.83□□□□□ -0.2
FAM78BQ5VT40 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 FITM1-202ENST00000559294 800 ntBASIC13.83□□□□□ -0.2
FAM78BQ5VT40 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 AC060834.1-201ENST00000443027 2032 ntBASIC13.83□□□□□ -0.2
FAM78BQ5VT40 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FAM78BQ5VT40 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 C2orf69P3-201ENST00000565542 1120 ntBASIC13.82□□□□□ -0.2
FAM78BQ5VT40 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms