Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.63■■□□□ 1.05
RC3H1Q5TC82 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RC3H1Q5TC82 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.63■■□□□ 1.05
RC3H1Q5TC82 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.63■■□□□ 1.05
RC3H1Q5TC82 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RC3H1Q5TC82 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RC3H1Q5TC82 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 AC027307.2-201ENST00000591252 911 ntBASIC21.62■■□□□ 1.05
RC3H1Q5TC82 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 GNAS-203ENST00000306120 1878 ntBASIC21.62■■□□□ 1.05
RC3H1Q5TC82 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RC3H1Q5TC82 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 MRPS18AP1-201ENST00000414458 589 ntBASIC21.61■■□□□ 1.05
RC3H1Q5TC82 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.61■■□□□ 1.05
RC3H1Q5TC82 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 AC138028.4-201ENST00000564984 1845 ntBASIC21.61■■□□□ 1.05
RC3H1Q5TC82 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RC3H1Q5TC82 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 RNU1-129P-201ENST00000384064 167 ntBASIC21.6■■□□□ 1.05
RC3H1Q5TC82 AC241585.1-201ENST00000433527 519 ntBASIC21.6■■□□□ 1.05
RC3H1Q5TC82 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 U1.21-201ENST00000580816 167 ntBASIC21.6■■□□□ 1.05
RC3H1Q5TC82 SPDYE22P-201ENST00000582158 798 ntBASIC21.6■■□□□ 1.05
RC3H1Q5TC82 AL358472.5-202ENST00000641448 1267 ntBASIC21.6■■□□□ 1.05
RC3H1Q5TC82 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RC3H1Q5TC82 AL138781.2-201ENST00000617896 1843 ntBASIC21.59■■□□□ 1.05
RC3H1Q5TC82 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.59■■□□□ 1.05
RC3H1Q5TC82 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms