Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 YBX1P2-201ENST00000489612 999 ntBASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 AC139887.4-201ENST00000607877 719 ntBASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 AC092068.3-201ENST00000587894 2016 ntBASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 AL596275.1-201ENST00000423464 877 ntBASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 AC007967.3-201ENST00000434308 558 ntBASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 BX664615.1-201ENST00000443558 458 ntBASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.41■□□□□ 0.22
RUNDC3AQ59EK9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 AL359075.1-203ENST00000462729 1002 ntBASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms