Protein–RNA interactions for Protein: Q3BBW0

NBPF9, Neuroblastoma breakpoint family member 9, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF9Q3BBW0 KRT18P55-202ENST00000578578 1546 ntBASIC20.52■□□□□ 0.87
NBPF9Q3BBW0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NBPF9Q3BBW0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NBPF9Q3BBW0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
NBPF9Q3BBW0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NBPF9Q3BBW0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.52■□□□□ 0.87
NBPF9Q3BBW0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.52■□□□□ 0.87
NBPF9Q3BBW0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NBPF9Q3BBW0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
NBPF9Q3BBW0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NBPF9Q3BBW0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 MIR661-201ENST00000384842 89 ntBASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 GPS2P2-201ENST00000430745 888 ntBASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.51■□□□□ 0.87
NBPF9Q3BBW0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 KRT18P32-201ENST00000424695 1287 ntBASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 CNN2P2-201ENST00000443536 909 ntBASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 CNN2P3-201ENST00000450201 906 ntBASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 AL136317.3-201ENST00000618497 906 ntBASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 AL645728.2-201ENST00000641974 660 ntBASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 TUBB3P1-201ENST00000405796 1332 ntBASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
NBPF9Q3BBW0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 MIR943-201ENST00000401286 94 ntBASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 AC236430.1-201ENST00000402231 743 ntBASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 UGT1A2P-201ENST00000454886 866 ntBASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 AL512356.2-201ENST00000546955 174 ntBASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 DUX4L17-201ENST00000557360 1267 ntBASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 AL135744.1-201ENST00000565098 629 ntBASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.49■□□□□ 0.87
NBPF9Q3BBW0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
NBPF9Q3BBW0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NBPF9Q3BBW0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NBPF9Q3BBW0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.48■□□□□ 0.87
NBPF9Q3BBW0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NBPF9Q3BBW0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.48■□□□□ 0.87
NBPF9Q3BBW0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms