Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.32■□□□□ 0.52
DSC1Q08554 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DSC1Q08554 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.32■□□□□ 0.52
DSC1Q08554 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DSC1Q08554 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DSC1Q08554 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
DSC1Q08554 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.32■□□□□ 0.52
DSC1Q08554 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DSC1Q08554 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.32■□□□□ 0.52
DSC1Q08554 AC004461.1-201ENST00000412461 403 ntBASIC18.32■□□□□ 0.52
DSC1Q08554 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.32■□□□□ 0.52
DSC1Q08554 AC140658.5-201ENST00000438532 169 ntBASIC18.32■□□□□ 0.52
DSC1Q08554 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.32■□□□□ 0.52
DSC1Q08554 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
DSC1Q08554 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.32■□□□□ 0.52
DSC1Q08554 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.32■□□□□ 0.52
DSC1Q08554 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.32■□□□□ 0.52
DSC1Q08554 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.32■□□□□ 0.52
DSC1Q08554 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.32■□□□□ 0.52
DSC1Q08554 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
DSC1Q08554 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
DSC1Q08554 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
DSC1Q08554 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DSC1Q08554 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
DSC1Q08554 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.32■□□□□ 0.52
DSC1Q08554 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.32■□□□□ 0.52
DSC1Q08554 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DSC1Q08554 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.32■□□□□ 0.52
DSC1Q08554 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DSC1Q08554 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.31■□□□□ 0.52
DSC1Q08554 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DSC1Q08554 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DSC1Q08554 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.31■□□□□ 0.52
DSC1Q08554 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
DSC1Q08554 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.31■□□□□ 0.52
DSC1Q08554 AC022145.2-201ENST00000598203 171 ntBASIC18.31■□□□□ 0.52
DSC1Q08554 AC099522.2-201ENST00000607001 744 ntBASIC18.31■□□□□ 0.52
DSC1Q08554 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.31■□□□□ 0.52
DSC1Q08554 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
DSC1Q08554 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.31■□□□□ 0.52
DSC1Q08554 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.31■□□□□ 0.52
DSC1Q08554 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.31■□□□□ 0.52
DSC1Q08554 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
DSC1Q08554 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 NOC2LP1-202ENST00000452600 2235 ntBASIC18.3■□□□□ 0.52
DSC1Q08554 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.3■□□□□ 0.52
DSC1Q08554 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
DSC1Q08554 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 AL139400.1-201ENST00000366220 510 ntBASIC18.3■□□□□ 0.52
DSC1Q08554 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 SLC25A1P3-201ENST00000395415 828 ntBASIC18.3■□□□□ 0.52
DSC1Q08554 AC002056.1-201ENST00000395613 760 ntBASIC18.3■□□□□ 0.52
DSC1Q08554 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.3■□□□□ 0.52
DSC1Q08554 CYMP-203ENST00000474680 1263 ntBASIC18.3■□□□□ 0.52
DSC1Q08554 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.3■□□□□ 0.52
DSC1Q08554 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.3■□□□□ 0.52
DSC1Q08554 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.3■□□□□ 0.52
DSC1Q08554 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.3■□□□□ 0.52
DSC1Q08554 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.3■□□□□ 0.52
DSC1Q08554 MIR4515-201ENST00000584082 81 ntBASIC18.3■□□□□ 0.52
DSC1Q08554 AC004835.2-201ENST00000603762 682 ntBASIC18.3■□□□□ 0.52
DSC1Q08554 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.3■□□□□ 0.52
DSC1Q08554 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DSC1Q08554 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.3■□□□□ 0.52
DSC1Q08554 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.3■□□□□ 0.52
DSC1Q08554 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DSC1Q08554 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DSC1Q08554 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms