Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CNN2P3-201ENST00000450201 906 ntBASIC19.62■□□□□ 0.73
CCNA1P78396 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.62■□□□□ 0.73
CCNA1P78396 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.62■□□□□ 0.73
CCNA1P78396 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.62■□□□□ 0.73
CCNA1P78396 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCNA1P78396 MIR4515-201ENST00000584082 81 ntBASIC19.62■□□□□ 0.73
CCNA1P78396 AL136317.3-201ENST00000618497 906 ntBASIC19.62■□□□□ 0.73
CCNA1P78396 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.62■□□□□ 0.73
CCNA1P78396 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.62■□□□□ 0.73
CCNA1P78396 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CCNA1P78396 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.62■□□□□ 0.73
CCNA1P78396 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.62■□□□□ 0.73
CCNA1P78396 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCNA1P78396 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCNA1P78396 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 AKAP8P1-201ENST00000434743 1349 ntBASIC19.61■□□□□ 0.73
CCNA1P78396 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 TFAMP1-201ENST00000412727 736 ntBASIC19.61■□□□□ 0.73
CCNA1P78396 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 AC107918.2-201ENST00000530817 355 ntBASIC19.61■□□□□ 0.73
CCNA1P78396 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.61■□□□□ 0.73
CCNA1P78396 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.61■□□□□ 0.73
CCNA1P78396 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 AL161645.1-201ENST00000622716 1255 ntBASIC19.61■□□□□ 0.73
CCNA1P78396 Z92544.3-201ENST00000624747 417 ntBASIC19.61■□□□□ 0.73
CCNA1P78396 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.61■□□□□ 0.73
CCNA1P78396 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCNA1P78396 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.61■□□□□ 0.73
CCNA1P78396 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCNA1P78396 AC090164.3-201ENST00000610780 2143 ntBASIC19.61■□□□□ 0.73
CCNA1P78396 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCNA1P78396 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CCNA1P78396 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCNA1P78396 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.6■□□□□ 0.73
CCNA1P78396 AC138028.4-201ENST00000564984 1845 ntBASIC19.6■□□□□ 0.73
CCNA1P78396 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.6■□□□□ 0.73
CCNA1P78396 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 KRT18P32-201ENST00000424695 1287 ntBASIC19.6■□□□□ 0.73
CCNA1P78396 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.6■□□□□ 0.73
CCNA1P78396 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 AC079140.1-201ENST00000508039 487 ntBASIC19.6■□□□□ 0.73
CCNA1P78396 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.6■□□□□ 0.73
CCNA1P78396 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.6■□□□□ 0.73
CCNA1P78396 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.6■□□□□ 0.73
CCNA1P78396 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.6■□□□□ 0.73
CCNA1P78396 RARRES2P8-201ENST00000566335 367 ntBASIC19.6■□□□□ 0.73
CCNA1P78396 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.6■□□□□ 0.73
CCNA1P78396 MIR4745-201ENST00000577608 62 ntBASIC19.6■□□□□ 0.73
CCNA1P78396 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCNA1P78396 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CCNA1P78396 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCNA1P78396 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCNA1P78396 AC098818.2-201ENST00000564925 2320 ntBASIC19.59■□□□□ 0.73
CCNA1P78396 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.59■□□□□ 0.73
CCNA1P78396 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNA1P78396 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CCNA1P78396 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CCNA1P78396 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCNA1P78396 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNA1P78396 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCNA1P78396 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.59■□□□□ 0.73
CCNA1P78396 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNA1P78396 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNA1P78396 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.59■□□□□ 0.73
CCNA1P78396 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCNA1P78396 AC069335.1-201ENST00000489972 472 ntBASIC19.59■□□□□ 0.73
CCNA1P78396 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.59■□□□□ 0.73
CCNA1P78396 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.59■□□□□ 0.73
CCNA1P78396 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNA1P78396 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.59■□□□□ 0.73
CCNA1P78396 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.59■□□□□ 0.73
CCNA1P78396 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNA1P78396 AC093503.3-201ENST00000624917 2352 ntBASIC19.59■□□□□ 0.73
CCNA1P78396 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms