Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP1P78357 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP1P78357 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP1P78357 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP1P78357 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTNAP1P78357 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTNAP1P78357 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.49■□□□□ 0.87
CNTNAP1P78357 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP1P78357 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP1P78357 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTNAP1P78357 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTNAP1P78357 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTNAP1P78357 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CNTNAP1P78357 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CNTNAP1P78357 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP1P78357 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP1P78357 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.48■□□□□ 0.87
CNTNAP1P78357 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.48■□□□□ 0.87
CNTNAP1P78357 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.48■□□□□ 0.87
CNTNAP1P78357 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP1P78357 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.48■□□□□ 0.87
CNTNAP1P78357 AL513480.1-201ENST00000451731 511 ntBASIC20.48■□□□□ 0.87
CNTNAP1P78357 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP1P78357 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.48■□□□□ 0.87
CNTNAP1P78357 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.48■□□□□ 0.87
CNTNAP1P78357 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CNTNAP1P78357 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP1P78357 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP1P78357 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP1P78357 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
CNTNAP1P78357 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP1P78357 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP1P78357 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CNTNAP1P78357 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.48■□□□□ 0.87
CNTNAP1P78357 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.47■□□□□ 0.87
CNTNAP1P78357 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 MRPS18AP1-201ENST00000414458 589 ntBASIC20.47■□□□□ 0.87
CNTNAP1P78357 AC069120.2-201ENST00000524091 540 ntBASIC20.47■□□□□ 0.87
CNTNAP1P78357 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.47■□□□□ 0.87
CNTNAP1P78357 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.47■□□□□ 0.87
CNTNAP1P78357 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CNTNAP1P78357 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.47■□□□□ 0.87
CNTNAP1P78357 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.47■□□□□ 0.87
CNTNAP1P78357 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CNTNAP1P78357 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP1P78357 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AC004890.2-204ENST00000481968 304 ntBASIC20.46■□□□□ 0.87
CNTNAP1P78357 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AC017083.2-201ENST00000608069 979 ntBASIC20.46■□□□□ 0.87
CNTNAP1P78357 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.46■□□□□ 0.87
CNTNAP1P78357 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AC090164.3-201ENST00000610780 2143 ntBASIC20.46■□□□□ 0.87
CNTNAP1P78357 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.46■□□□□ 0.87
CNTNAP1P78357 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP1P78357 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.45■□□□□ 0.87
CNTNAP1P78357 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms