Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.34■□□□□ 0.21
RPS3AP61247 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RPS3AP61247 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.34■□□□□ 0.21
RPS3AP61247 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS3AP61247 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RPS3AP61247 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.34■□□□□ 0.21
RPS3AP61247 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.34■□□□□ 0.21
RPS3AP61247 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS3AP61247 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RPS3AP61247 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.34■□□□□ 0.21
RPS3AP61247 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 AC005052.1-201ENST00000625181 2492 ntBASIC16.34■□□□□ 0.21
RPS3AP61247 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS3AP61247 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS3AP61247 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.33■□□□□ 0.21
RPS3AP61247 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.33■□□□□ 0.21
RPS3AP61247 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPS3AP61247 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPS3AP61247 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPS3AP61247 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RPS3AP61247 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RPS3AP61247 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RPS3AP61247 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.33■□□□□ 0.2
RPS3AP61247 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.33■□□□□ 0.2
RPS3AP61247 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RPS3AP61247 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.33■□□□□ 0.2
RPS3AP61247 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.33■□□□□ 0.2
RPS3AP61247 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.33■□□□□ 0.2
RPS3AP61247 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.33■□□□□ 0.2
RPS3AP61247 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
RPS3AP61247 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.33■□□□□ 0.2
RPS3AP61247 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
RPS3AP61247 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.33■□□□□ 0.2
RPS3AP61247 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RPS3AP61247 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RPS3AP61247 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.33■□□□□ 0.2
RPS3AP61247 IGHV3-41-201ENST00000613121 348 ntBASIC16.33■□□□□ 0.2
RPS3AP61247 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.33■□□□□ 0.2
RPS3AP61247 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.33■□□□□ 0.2
RPS3AP61247 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.33■□□□□ 0.2
RPS3AP61247 AL353692.3-201ENST00000407031 1396 ntBASIC16.33■□□□□ 0.2
RPS3AP61247 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RPS3AP61247 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
RPS3AP61247 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS3AP61247 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.32■□□□□ 0.2
RPS3AP61247 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.32■□□□□ 0.2
RPS3AP61247 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.32■□□□□ 0.2
RPS3AP61247 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.32■□□□□ 0.2
RPS3AP61247 ATP5G2P1-201ENST00000433580 426 ntBASIC16.32■□□□□ 0.2
RPS3AP61247 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.32■□□□□ 0.2
RPS3AP61247 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.32■□□□□ 0.2
RPS3AP61247 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.32■□□□□ 0.2
RPS3AP61247 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.32■□□□□ 0.2
RPS3AP61247 AL024508.2-201ENST00000607749 1894 ntBASIC16.32■□□□□ 0.2
RPS3AP61247 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.32■□□□□ 0.2
RPS3AP61247 AC016734.2-201ENST00000624325 1377 ntBASIC16.32■□□□□ 0.2
RPS3AP61247 PHGDH-209ENST00000641074 1780 ntBASIC16.32■□□□□ 0.2
RPS3AP61247 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.32■□□□□ 0.2
RPS3AP61247 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.32■□□□□ 0.2
RPS3AP61247 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms