Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN2P57739 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN2P57739 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN2P57739 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN2P57739 LINC00304-203ENST00000565008 1864 ntBASIC17.1■□□□□ 0.33
CLDN2P57739 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN2P57739 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN2P57739 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN2P57739 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN2P57739 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN2P57739 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN2P57739 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN2P57739 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN2P57739 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN2P57739 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLDN2P57739 AP001160.2-201ENST00000596071 487 ntBASIC17.1■□□□□ 0.33
CLDN2P57739 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN2P57739 AC004877.2-201ENST00000623941 599 ntBASIC17.1■□□□□ 0.33
CLDN2P57739 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN2P57739 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN2P57739 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN2P57739 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN2P57739 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN2P57739 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN2P57739 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN2P57739 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CLDN2P57739 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN2P57739 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CLDN2P57739 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN2P57739 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN2P57739 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN2P57739 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN2P57739 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CLDN2P57739 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN2P57739 AL078644.1-201ENST00000609881 752 ntBASIC17.09■□□□□ 0.33
CLDN2P57739 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLDN2P57739 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN2P57739 BCAR1-209ENST00000546196 1340 ntBASIC17.09■□□□□ 0.33
CLDN2P57739 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN2P57739 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLDN2P57739 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN2P57739 AL355312.1-201ENST00000407115 2176 ntBASIC17.09■□□□□ 0.33
CLDN2P57739 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN2P57739 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CLDN2P57739 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN2P57739 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN2P57739 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN2P57739 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN2P57739 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN2P57739 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.08■□□□□ 0.33
CLDN2P57739 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CLDN2P57739 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN2P57739 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CLDN2P57739 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN2P57739 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CLDN2P57739 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN2P57739 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN2P57739 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN2P57739 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN2P57739 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN2P57739 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN2P57739 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLDN2P57739 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN2P57739 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 AC211486.1-202ENST00000416371 468 ntBASIC17.08■□□□□ 0.32
CLDN2P57739 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.08■□□□□ 0.32
CLDN2P57739 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN2P57739 AC211476.1-201ENST00000503899 468 ntBASIC17.08■□□□□ 0.32
CLDN2P57739 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
CLDN2P57739 AC005829.1-201ENST00000570002 483 ntBASIC17.08■□□□□ 0.32
CLDN2P57739 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN2P57739 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN2P57739 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN2P57739 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLDN2P57739 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms