Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN6P56747 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN6P56747 AL513480.1-201ENST00000451731 511 ntBASIC16.61■□□□□ 0.25
CLDN6P56747 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN6P56747 IGHV3-52-201ENST00000519770 353 ntBASIC16.61■□□□□ 0.25
CLDN6P56747 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN6P56747 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN6P56747 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.61■□□□□ 0.25
CLDN6P56747 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN6P56747 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN6P56747 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN6P56747 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN6P56747 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN6P56747 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLDN6P56747 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN6P56747 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN6P56747 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN6P56747 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CLDN6P56747 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN6P56747 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
CLDN6P56747 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDN6P56747 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN6P56747 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDN6P56747 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDN6P56747 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CLDN6P56747 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN6P56747 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN6P56747 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN6P56747 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN6P56747 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 ACTL9-202ENST00000612068 1252 ntBASIC16.6■□□□□ 0.25
CLDN6P56747 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN6P56747 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN6P56747 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN6P56747 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CLDN6P56747 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLDN6P56747 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN6P56747 BCL2-203ENST00000589955 5011 ntBASIC16.6■□□□□ 0.25
CLDN6P56747 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN6P56747 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDN6P56747 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN6P56747 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN6P56747 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLDN6P56747 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CLDN6P56747 AC104581.1-202ENST00000635932 2618 ntBASIC16.59■□□□□ 0.25
CLDN6P56747 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLDN6P56747 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN6P56747 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 ADH5P3-201ENST00000433842 1137 ntBASIC16.59■□□□□ 0.25
CLDN6P56747 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN6P56747 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLDN6P56747 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN6P56747 KRT8P48-201ENST00000515599 1220 ntBASIC16.59■□□□□ 0.25
CLDN6P56747 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.59■□□□□ 0.25
CLDN6P56747 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDN6P56747 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 AC026471.1-201ENST00000564629 3026 ntBASIC16.59■□□□□ 0.25
CLDN6P56747 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN6P56747 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 AL121761.2-201ENST00000598007 1648 ntBASIC16.59■□□□□ 0.25
CLDN6P56747 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN6P56747 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN6P56747 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN6P56747 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms