Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
WNT3P56703 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.42■□□□□ 0.22
WNT3P56703 LINC00265-3P-201ENST00000447588 903 ntBASIC16.42■□□□□ 0.22
WNT3P56703 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.42■□□□□ 0.22
WNT3P56703 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.42■□□□□ 0.22
WNT3P56703 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
WNT3P56703 AC111152.3-201ENST00000569699 673 ntBASIC16.42■□□□□ 0.22
WNT3P56703 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.42■□□□□ 0.22
WNT3P56703 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.42■□□□□ 0.22
WNT3P56703 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.41■□□□□ 0.22
WNT3P56703 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
WNT3P56703 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
WNT3P56703 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.41■□□□□ 0.22
WNT3P56703 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
WNT3P56703 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.41■□□□□ 0.22
WNT3P56703 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.41■□□□□ 0.22
WNT3P56703 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.41■□□□□ 0.22
WNT3P56703 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.41■□□□□ 0.22
WNT3P56703 AC124947.2-201ENST00000547118 1133 ntBASIC16.41■□□□□ 0.22
WNT3P56703 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.41■□□□□ 0.22
WNT3P56703 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.41■□□□□ 0.22
WNT3P56703 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.41■□□□□ 0.22
WNT3P56703 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.41■□□□□ 0.22
WNT3P56703 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
WNT3P56703 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 PCDHA14-201ENST00000506751 2298 ntBASIC16.41■□□□□ 0.22
WNT3P56703 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 RNF216P1-203ENST00000404404 2427 ntBASIC16.41■□□□□ 0.22
WNT3P56703 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 AC092068.3-201ENST00000587894 2016 ntBASIC16.41■□□□□ 0.22
WNT3P56703 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
WNT3P56703 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.41■□□□□ 0.22
WNT3P56703 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
WNT3P56703 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
WNT3P56703 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
WNT3P56703 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
WNT3P56703 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 AL135999.2-201ENST00000622438 1686 ntBASIC16.4■□□□□ 0.22
WNT3P56703 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.4■□□□□ 0.22
WNT3P56703 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 TNRC18P3-201ENST00000441896 2691 ntBASIC16.4■□□□□ 0.22
WNT3P56703 EGFEM1P-202ENST00000431685 1563 ntBASIC16.4■□□□□ 0.22
WNT3P56703 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.4■□□□□ 0.22
WNT3P56703 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.4■□□□□ 0.22
WNT3P56703 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 AP000867.3-201ENST00000524675 377 ntBASIC16.4■□□□□ 0.22
WNT3P56703 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.4■□□□□ 0.22
WNT3P56703 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.4■□□□□ 0.22
WNT3P56703 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.4■□□□□ 0.22
WNT3P56703 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
WNT3P56703 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 AC132938.5-201ENST00000624980 1813 ntBASIC16.4■□□□□ 0.22
WNT3P56703 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms