Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
AP1S2P56377 LINC02012-201ENST00000608206 1725 ntBASIC16.9■□□□□ 0.3
AP1S2P56377 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
AP1S2P56377 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
AP1S2P56377 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
AP1S2P56377 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.9■□□□□ 0.3
AP1S2P56377 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.9■□□□□ 0.3
AP1S2P56377 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.9■□□□□ 0.3
AP1S2P56377 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.9■□□□□ 0.3
AP1S2P56377 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.9■□□□□ 0.3
AP1S2P56377 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.9■□□□□ 0.3
AP1S2P56377 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.9■□□□□ 0.3
AP1S2P56377 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.9■□□□□ 0.3
AP1S2P56377 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
AP1S2P56377 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.9■□□□□ 0.3
AP1S2P56377 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
AP1S2P56377 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
AP1S2P56377 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.9■□□□□ 0.3
AP1S2P56377 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.9■□□□□ 0.3
AP1S2P56377 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.9■□□□□ 0.3
AP1S2P56377 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
AP1S2P56377 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S2P56377 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.89■□□□□ 0.3
AP1S2P56377 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
AP1S2P56377 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.89■□□□□ 0.29
AP1S2P56377 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.89■□□□□ 0.29
AP1S2P56377 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.89■□□□□ 0.29
AP1S2P56377 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
AP1S2P56377 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.89■□□□□ 0.29
AP1S2P56377 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.89■□□□□ 0.29
AP1S2P56377 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.89■□□□□ 0.29
AP1S2P56377 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.89■□□□□ 0.29
AP1S2P56377 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.89■□□□□ 0.29
AP1S2P56377 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
AP1S2P56377 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AP1S2P56377 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
AP1S2P56377 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.89■□□□□ 0.29
AP1S2P56377 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
AP1S2P56377 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.89■□□□□ 0.29
AP1S2P56377 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S2P56377 AC079776.2-201ENST00000641154 1609 ntBASIC16.88■□□□□ 0.29
AP1S2P56377 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP1S2P56377 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
AP1S2P56377 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 AP005117.1-201ENST00000584346 1413 ntBASIC16.88■□□□□ 0.29
AP1S2P56377 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
AP1S2P56377 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.88■□□□□ 0.29
AP1S2P56377 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
AP1S2P56377 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 RBM17P3-201ENST00000417687 1192 ntBASIC16.88■□□□□ 0.29
AP1S2P56377 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.88■□□□□ 0.29
AP1S2P56377 AC106795.1-205ENST00000512851 1056 ntBASIC16.88■□□□□ 0.29
AP1S2P56377 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.88■□□□□ 0.29
AP1S2P56377 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.88■□□□□ 0.29
AP1S2P56377 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.88■□□□□ 0.29
AP1S2P56377 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.88■□□□□ 0.29
AP1S2P56377 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S2P56377 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP1S2P56377 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms