Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH12P55289 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH12P55289 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH12P55289 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH12P55289 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH12P55289 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH12P55289 VENTXP5-201ENST00000523979 775 ntBASIC16.21■□□□□ 0.19
CDH12P55289 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH12P55289 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH12P55289 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH12P55289 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH12P55289 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH12P55289 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH12P55289 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH12P55289 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH12P55289 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH12P55289 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CDH12P55289 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.21■□□□□ 0.18
CDH12P55289 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH12P55289 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDH12P55289 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
CDH12P55289 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.21■□□□□ 0.18
CDH12P55289 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
CDH12P55289 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CDH12P55289 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH12P55289 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH12P55289 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH12P55289 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH12P55289 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH12P55289 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH12P55289 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH12P55289 AC104076.2-201ENST00000448912 469 ntBASIC16.2■□□□□ 0.18
CDH12P55289 AC092647.4-201ENST00000457211 535 ntBASIC16.2■□□□□ 0.18
CDH12P55289 AC068472.1-201ENST00000474589 881 ntBASIC16.2■□□□□ 0.18
CDH12P55289 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.2■□□□□ 0.18
CDH12P55289 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH12P55289 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH12P55289 AC005332.3-201ENST00000589904 676 ntBASIC16.2■□□□□ 0.18
CDH12P55289 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH12P55289 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH12P55289 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
CDH12P55289 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH12P55289 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH12P55289 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDH12P55289 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH12P55289 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH12P55289 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH12P55289 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH12P55289 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH12P55289 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDH12P55289 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDH12P55289 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH12P55289 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH12P55289 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH12P55289 MTCL1P1-201ENST00000446207 792 ntBASIC16.19■□□□□ 0.18
CDH12P55289 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH12P55289 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH12P55289 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.19■□□□□ 0.18
CDH12P55289 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH12P55289 AC046185.3-201ENST00000623228 1824 ntBASIC16.19■□□□□ 0.18
CDH12P55289 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH12P55289 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH12P55289 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH12P55289 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH12P55289 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH12P55289 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH12P55289 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms