Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.417e-11■□□□□ 10
NCBP2P52298 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.47□□□□□ -0.419e-7■□□□□ 10
NCBP2P52298 BCS1L-208ENST00000428880 804 ntTSL 412.47□□□□□ -0.419e-7■□□□□ 10
NCBP2P52298 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.429e-7■□□□□ 10
NCBP2P52298 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.34□□□□□ -0.439e-7■□□□□ 10
NCBP2P52298 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.449e-7■□□□□ 10
NCBP2P52298 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.459e-7■□□□□ 10
NCBP2P52298 CENPI-203ENST00000403304 622 ntTSL 311.81□□□□□ -0.529e-7■□□□□ 10
NCBP2P52298 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.547e-11■□□□□ 10
NCBP2P52298 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.579e-7■□□□□ 10
NCBP2P52298 TPT1-AS1-217ENST00000522859 769 ntTSL 211.43□□□□□ -0.589e-7■□□□□ 10
NCBP2P52298 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.69e-7■□□□□ 10
NCBP2P52298 HJURP-209ENST00000454020 806 ntTSL 511.27□□□□□ -0.617e-11■□□□□ 10
NCBP2P52298 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.612e-8■□□□□ 10
NCBP2P52298 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC11.24□□□□□ -0.619e-7■□□□□ 10
NCBP2P52298 BCS1L-213ENST00000443791 580 ntTSL 311.12□□□□□ -0.639e-7■□□□□ 10
NCBP2P52298 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.637e-11■□□□□ 10
NCBP2P52298 POLDIP3-207ENST00000463133 563 ntTSL 410.71□□□□□ -0.699e-7■□□□□ 10
NCBP2P52298 S100PBP-202ENST00000373475 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.79e-7■□□□□ 10
NCBP2P52298 POLDIP3-201ENST00000252115 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.729e-7■□□□□ 10
NCBP2P52298 POLDIP3-205ENST00000451060 3491 ntTSL 2 BASIC10.43□□□□□ -0.749e-7■□□□□ 10
NCBP2P52298 POLDIP3-203ENST00000348657 3323 ntTSL 1 (best) BASIC10.41□□□□□ -0.749e-7■□□□□ 10
NCBP2P52298 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.789e-7■□□□□ 10
NCBP2P52298 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.849e-7■□□□□ 10
NCBP2P52298 S100PBP-210ENST00000526230 573 ntTSL 49.65□□□□□ -0.869e-7■□□□□ 10
NCBP2P52298 BCS1L-219ENST00000490188 647 ntTSL 39.49□□□□□ -0.899e-7■□□□□ 10
NCBP2P52298 S100PBP-201ENST00000356689 3583 ntTSL 1 (best)9.26□□□□□ -0.939e-7■□□□□ 10
NCBP2P52298 POLDIP3-204ENST00000445215 3337 ntTSL 1 (best)8.84□□□□□ -0.999e-7■□□□□ 10
NCBP2P52298 CCT7-210ENST00000473786 811 ntTSL 58.72□□□□□ -1.019e-16■□□□□ 10
NCBP2P52298 S100PBP-214ENST00000530710 725 ntTSL 48.6□□□□□ -1.039e-7■□□□□ 10
NCBP2P52298 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.19e-7■□□□□ 10
NCBP2P52298 S100PBP-216ENST00000531256 551 ntTSL 47.34□□□□□ -1.239e-7■□□□□ 10
NCBP2P52298 TPT1-AS1-212ENST00000520924 553 ntTSL 46.77□□□□□ -1.339e-7■□□□□ 10
NCBP2P52298 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.339e-7■□□□□ 10
NCBP2P52298 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.64□□□□□ -1.359e-7■□□□□ 10
NCBP2P52298 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.58□□□□□ -1.369e-7■□□□□ 10
NCBP2P52298 CCT7-214ENST00000492253 531 ntTSL 46.24□□□□□ -1.419e-16■□□□□ 10
NCBP2P52298 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.55□□□□□ -1.529e-7■□□□□ 10
NCBP2P52298 S100PBP-206ENST00000477248 345 ntTSL 35.08□□□□□ -1.69e-7■□□□□ 10
NCBP2P52298 PAPOLG-207ENST00000496283 4193 ntTSL 1 (best)2.64□□□□□ -1.999e-7■□□□□ 10
NCBP2P52298 PAPOLG-203ENST00000414060 3511 ntTSL 1 (best)2.48□□□□□ -2.019e-7■□□□□ 10
NCBP2P52298 CENPI-205ENST00000435570 390 ntTSL 32.36□□□□□ -2.039e-7■□□□□ 10
NCBP2P52298 SACM1L-208ENST00000463237 962 ntTSL 222.37■■□□□ 1.172e-7■□□□□ 10
NCBP2P52298 SACM1L-209ENST00000463347 854 ntTSL 220.56■□□□□ 0.882e-7■□□□□ 10
NCBP2P52298 SACM1L-204ENST00000438671 542 ntTSL 420.43■□□□□ 0.862e-7■□□□□ 10
NCBP2P52298 SACM1L-207ENST00000455997 4661 ntTSL 1 (best)19.77■□□□□ 0.752e-7■□□□□ 10
NCBP2P52298 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.48■□□□□ 0.712e-7■□□□□ 10
NCBP2P52298 SACM1L-214ENST00000478586 534 ntTSL 414.33□□□□□ -0.122e-7■□□□□ 10
NCBP2P52298 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.322e-7■□□□□ 10
NCBP2P52298 SACM1L-205ENST00000441228 2013 ntTSL 27.13□□□□□ -1.272e-7■□□□□ 10
NCBP2P52298 SACM1L-206ENST00000445499 583 ntTSL 44.43□□□□□ -1.72e-7■□□□□ 10
NCBP2P52298 SACM1L-212ENST00000464524 571 ntTSL 42.61□□□□□ -1.992e-7■□□□□ 10
NCBP2P52298 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.164e-6■□□□□ 10
NCBP2P52298 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.491e-8■□□□□ 10
NCBP2P52298 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.541e-8■□□□□ 10
NCBP2P52298 POLE-213ENST00000539357 364 ntTSL 310.4□□□□□ -0.741e-8■□□□□ 10
NCBP2P52298 POLE-210ENST00000537064 8011 ntTSL 1 (best)10.26□□□□□ -0.771e-8■□□□□ 10
NCBP2P52298 ACD-210ENST00000602821 544 ntTSL 421.21■□□□□ 0.992e-7■□□□□ 10
NCBP2P52298 ACD-213ENST00000602945 805 ntTSL 518.84■□□□□ 0.612e-7■□□□□ 10
NCBP2P52298 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.552e-7■□□□□ 10
NCBP2P52298 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.542e-7■□□□□ 10
NCBP2P52298 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.472e-7■□□□□ 10
NCBP2P52298 ACD-209ENST00000602780 579 ntTSL 217.54■□□□□ 0.42e-7■□□□□ 10
NCBP2P52298 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.352e-7■□□□□ 10
NCBP2P52298 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.332e-7■□□□□ 10
NCBP2P52298 ACD-205ENST00000602423 386 ntTSL 316.85■□□□□ 0.292e-7■□□□□ 10
NCBP2P52298 ACD-212ENST00000602860 1858 ntTSL 515.9■□□□□ 0.142e-7■□□□□ 10
NCBP2P52298 ACD-207ENST00000602622 2526 ntTSL 215.57■□□□□ 0.082e-7■□□□□ 10
NCBP2P52298 ACD-206ENST00000602519 997 ntTSL 215.06■□□□□ 02e-7■□□□□ 10
NCBP2P52298 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.12□□□□□ -0.157e-9■□□□□ 10
NCBP2P52298 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.337e-9■□□□□ 10
NCBP2P52298 SNRNP27-203ENST00000450162 766 ntTSL 212.09□□□□□ -0.477e-9■□□□□ 10
NCBP2P52298 RNF31-203ENST00000491351 1804 ntTSL 523.19■■□□□ 1.32e-10■□□□□ 10
NCBP2P52298 RNF31-219ENST00000559882 554 ntTSL 420.79■□□□□ 0.922e-10■□□□□ 10
NCBP2P52298 RNF31-225ENST00000560875 550 ntTSL 419.46■□□□□ 0.712e-10■□□□□ 10
NCBP2P52298 RNF31-205ENST00000557991 578 ntTSL 419.44■□□□□ 0.72e-10■□□□□ 10
NCBP2P52298 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.072e-10■□□□□ 10
NCBP2P52298 RNF31-216ENST00000559533 889 ntTSL 414.04□□□□□ -0.162e-10■□□□□ 10
NCBP2P52298 RNF31-207ENST00000558634 537 ntTSL 413.46□□□□□ -0.252e-10■□□□□ 10
NCBP2P52298 RNF31-204ENST00000557878 574 ntTSL 412.98□□□□□ -0.332e-10■□□□□ 10
NCBP2P52298 RNF31-210ENST00000559260 551 ntTSL 512.6□□□□□ -0.392e-10■□□□□ 10
NCBP2P52298 RNF31-213ENST00000559438 557 ntTSL 411.95□□□□□ -0.52e-10■□□□□ 10
NCBP2P52298 RNF31-212ENST00000559308 559 ntTSL 511.02□□□□□ -0.652e-10■□□□□ 10
NCBP2P52298 RNF31-220ENST00000560071 576 ntTSL 510.79□□□□□ -0.682e-10■□□□□ 10
NCBP2P52298 RNF31-211ENST00000559275 3198 ntTSL 1 (best) BASIC9.98□□□□□ -0.812e-10■□□□□ 10
NCBP2P52298 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.62e-17■□□□□ 10
NCBP2P52298 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.45■■□□□ 1.994e-7■□□□□ 9.9
NCBP2P52298 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.644e-7■□□□□ 9.9
NCBP2P52298 AGAP1-214ENST00000635100 2478 ntTSL 514.46□□□□□ -0.094e-7■□□□□ 9.9
NCBP2P52298 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.214e-7■□□□□ 9.9
NCBP2P52298 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.866e-9■□□□□ 9.9
NCBP2P52298 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.376e-9■□□□□ 9.9
NCBP2P52298 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.021e-9■□□□□ 9.9
NCBP2P52298 RHOT2-224ENST00000569943 635 ntTSL 313.69□□□□□ -0.223e-6■□□□□ 9.9
NCBP2P52298 HIST1H2AC-201ENST00000314088 1668 ntTSL 1 (best)16.38■□□□□ 0.213e-23■□□□□ 9.9
NCBP2P52298 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.063e-23■□□□□ 9.9
NCBP2P52298 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.123e-23■□□□□ 9.9
NCBP2P52298 NHSL1-209ENST00000534376 609 ntTSL 311.57□□□□□ -0.562e-6■□□□□ 9.9
NCBP2P52298 NHSL1-205ENST00000468095 459 ntTSL 311.55□□□□□ -0.562e-6■□□□□ 9.9
NCBP2P52298 ST3GAL1-202ENST00000517668 665 ntTSL 517.78■□□□□ 0.442e-7■□□□□ 9.9
Retrieved 100 of 18,329 protein–RNA pairs in 315.8 ms