Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC30.62■■■□□ 2.49
SMARCA4P51532 AL132655.2-201ENST00000596276 594 ntBASIC30.62■■■□□ 2.49
SMARCA4P51532 AL359881.2-201ENST00000602973 570 ntBASIC30.62■■■□□ 2.49
SMARCA4P51532 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
SMARCA4P51532 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA4P51532 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCA4P51532 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA4P51532 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA4P51532 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCA4P51532 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA4P51532 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA4P51532 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
SMARCA4P51532 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCA4P51532 AC105233.2-201ENST00000523697 349 ntBASIC30.62■■■□□ 2.49
SMARCA4P51532 AF228730.5-201ENST00000530288 346 ntBASIC30.62■■■□□ 2.49
SMARCA4P51532 RARRES2P9-201ENST00000565168 469 ntBASIC30.62■■■□□ 2.49
SMARCA4P51532 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA4P51532 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC30.61■■■□□ 2.49
SMARCA4P51532 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA4P51532 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA4P51532 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA4P51532 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA4P51532 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA4P51532 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC30.61■■■□□ 2.49
SMARCA4P51532 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA4P51532 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC30.61■■■□□ 2.49
SMARCA4P51532 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC30.61■■■□□ 2.49
SMARCA4P51532 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC30.61■■■□□ 2.49
SMARCA4P51532 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC30.61■■■□□ 2.49
SMARCA4P51532 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC30.61■■■□□ 2.49
SMARCA4P51532 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA4P51532 AC027369.6-201ENST00000525520 931 ntBASIC30.61■■■□□ 2.49
SMARCA4P51532 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC30.61■■■□□ 2.49
SMARCA4P51532 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA4P51532 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC30.61■■■□□ 2.49
SMARCA4P51532 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
SMARCA4P51532 AC073389.1-201ENST00000595595 795 ntBASIC30.61■■■□□ 2.49
SMARCA4P51532 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC30.61■■■□□ 2.49
SMARCA4P51532 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA4P51532 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA4P51532 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC30.6■■■□□ 2.49
SMARCA4P51532 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC30.6■■■□□ 2.49
SMARCA4P51532 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA4P51532 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA4P51532 ARSEP1-201ENST00000420443 635 ntBASIC30.6■■■□□ 2.49
SMARCA4P51532 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA4P51532 BANF1P1-201ENST00000553684 263 ntBASIC30.6■■■□□ 2.49
SMARCA4P51532 WASH4P-201ENST00000564273 1246 ntBASIC30.6■■■□□ 2.49
SMARCA4P51532 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC30.6■■■□□ 2.49
SMARCA4P51532 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC30.6■■■□□ 2.49
SMARCA4P51532 AC008738.7-201ENST00000609744 511 ntBASIC30.6■■■□□ 2.49
SMARCA4P51532 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA4P51532 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA4P51532 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC30.59■■■□□ 2.49
SMARCA4P51532 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC30.59■■■□□ 2.49
SMARCA4P51532 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCA4P51532 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCA4P51532 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCA4P51532 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCA4P51532 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
SMARCA4P51532 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC30.59■■■□□ 2.49
SMARCA4P51532 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC30.59■■■□□ 2.49
SMARCA4P51532 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC30.59■■■□□ 2.49
SMARCA4P51532 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCA4P51532 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
SMARCA4P51532 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCA4P51532 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC30.59■■■□□ 2.49
SMARCA4P51532 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC30.59■■■□□ 2.49
SMARCA4P51532 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
SMARCA4P51532 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC30.58■■■□□ 2.49
SMARCA4P51532 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC30.58■■■□□ 2.49
SMARCA4P51532 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA4P51532 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC30.58■■■□□ 2.49
SMARCA4P51532 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
SMARCA4P51532 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA4P51532 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA4P51532 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA4P51532 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC30.58■■■□□ 2.49
SMARCA4P51532 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA4P51532 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA4P51532 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA4P51532 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA4P51532 AL138918.1-201ENST00000568306 659 ntBASIC30.58■■■□□ 2.49
SMARCA4P51532 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA4P51532 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
SMARCA4P51532 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCA4P51532 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC30.57■■■□□ 2.48
SMARCA4P51532 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCA4P51532 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCA4P51532 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCA4P51532 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC30.57■■■□□ 2.48
SMARCA4P51532 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCA4P51532 HNRNPA3P1-201ENST00000401429 1139 ntBASIC30.57■■■□□ 2.48
SMARCA4P51532 AC079776.1-201ENST00000401540 1152 ntBASIC30.57■■■□□ 2.48
SMARCA4P51532 HNRNPA3P5-201ENST00000455201 833 ntBASIC30.57■■■□□ 2.48
SMARCA4P51532 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
SMARCA4P51532 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
SMARCA4P51532 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCA4P51532 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCA4P51532 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms