Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NEDD4P46934 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.4■□□□□ 0.86
NEDD4P46934 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.4■□□□□ 0.86
NEDD4P46934 AC092910.1-201ENST00000482027 1129 ntBASIC20.4■□□□□ 0.86
NEDD4P46934 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEDD4P46934 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
NEDD4P46934 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.4■□□□□ 0.86
NEDD4P46934 AC105339.3-201ENST00000560043 636 ntBASIC20.4■□□□□ 0.86
NEDD4P46934 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.4■□□□□ 0.86
NEDD4P46934 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NEDD4P46934 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.4■□□□□ 0.86
NEDD4P46934 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
NEDD4P46934 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.4■□□□□ 0.86
NEDD4P46934 AC006557.2-201ENST00000592985 1240 ntBASIC20.4■□□□□ 0.86
NEDD4P46934 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
NEDD4P46934 AC116407.3-201ENST00000623905 1129 ntBASIC20.4■□□□□ 0.86
NEDD4P46934 AC117500.6-201ENST00000624871 588 ntBASIC20.4■□□□□ 0.86
NEDD4P46934 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEDD4P46934 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEDD4P46934 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NEDD4P46934 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEDD4P46934 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NEDD4P46934 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEDD4P46934 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEDD4P46934 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NEDD4P46934 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEDD4P46934 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEDD4P46934 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.39■□□□□ 0.86
NEDD4P46934 AL023806.1-201ENST00000603994 1649 ntBASIC20.39■□□□□ 0.86
NEDD4P46934 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.39■□□□□ 0.86
NEDD4P46934 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NEDD4P46934 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEDD4P46934 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.39■□□□□ 0.85
NEDD4P46934 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEDD4P46934 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NEDD4P46934 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.39■□□□□ 0.85
NEDD4P46934 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.39■□□□□ 0.85
NEDD4P46934 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.39■□□□□ 0.85
NEDD4P46934 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
NEDD4P46934 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.39■□□□□ 0.85
NEDD4P46934 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.39■□□□□ 0.85
NEDD4P46934 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEDD4P46934 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NEDD4P46934 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.39■□□□□ 0.85
NEDD4P46934 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NEDD4P46934 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.39■□□□□ 0.85
NEDD4P46934 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.39■□□□□ 0.85
NEDD4P46934 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.39■□□□□ 0.85
NEDD4P46934 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NEDD4P46934 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NEDD4P46934 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEDD4P46934 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NEDD4P46934 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NEDD4P46934 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.38■□□□□ 0.85
NEDD4P46934 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEDD4P46934 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NEDD4P46934 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
NEDD4P46934 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEDD4P46934 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.38■□□□□ 0.85
NEDD4P46934 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEDD4P46934 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEDD4P46934 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.38■□□□□ 0.85
NEDD4P46934 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEDD4P46934 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
NEDD4P46934 AC098831.1-202ENST00000438821 336 ntBASIC20.38■□□□□ 0.85
NEDD4P46934 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.38■□□□□ 0.85
NEDD4P46934 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.38■□□□□ 0.85
NEDD4P46934 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.38■□□□□ 0.85
NEDD4P46934 AL356488.2-201ENST00000602755 427 ntBASIC20.38■□□□□ 0.85
NEDD4P46934 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.38■□□□□ 0.85
NEDD4P46934 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEDD4P46934 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEDD4P46934 AC106820.2-201ENST00000563775 3264 ntBASIC20.38■□□□□ 0.85
NEDD4P46934 EGFEM1P-202ENST00000431685 1563 ntBASIC20.38■□□□□ 0.85
NEDD4P46934 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NEDD4P46934 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEDD4P46934 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEDD4P46934 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
NEDD4P46934 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.37■□□□□ 0.85
NEDD4P46934 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NEDD4P46934 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NEDD4P46934 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEDD4P46934 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEDD4P46934 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEDD4P46934 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.37■□□□□ 0.85
NEDD4P46934 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.37■□□□□ 0.85
NEDD4P46934 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.37■□□□□ 0.85
NEDD4P46934 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.37■□□□□ 0.85
NEDD4P46934 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.37■□□□□ 0.85
NEDD4P46934 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.37■□□□□ 0.85
NEDD4P46934 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.37■□□□□ 0.85
NEDD4P46934 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
NEDD4P46934 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEDD4P46934 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEDD4P46934 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEDD4P46934 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEDD4P46934 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEDD4P46934 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEDD4P46934 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NEDD4P46934 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms