Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.6■□□□□ 0.41
GRIA1P42261 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GRIA1P42261 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GRIA1P42261 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GRIA1P42261 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
GRIA1P42261 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GRIA1P42261 RNF216P1-203ENST00000404404 2427 ntBASIC17.59■□□□□ 0.41
GRIA1P42261 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.59■□□□□ 0.41
GRIA1P42261 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GRIA1P42261 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.59■□□□□ 0.41
GRIA1P42261 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
GRIA1P42261 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 AC009336.1-201ENST00000608941 1553 ntBASIC17.59■□□□□ 0.41
GRIA1P42261 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.59■□□□□ 0.41
GRIA1P42261 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GRIA1P42261 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.59■□□□□ 0.41
GRIA1P42261 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
GRIA1P42261 Z69720.1-201ENST00000601483 472 ntBASIC17.59■□□□□ 0.41
GRIA1P42261 NPAP1P7-201ENST00000613027 823 ntBASIC17.59■□□□□ 0.41
GRIA1P42261 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.59■□□□□ 0.41
GRIA1P42261 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 AP000550.4-202ENST00000639755 178 ntBASIC17.59■□□□□ 0.41
GRIA1P42261 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GRIA1P42261 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIA1P42261 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
GRIA1P42261 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
GRIA1P42261 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GRIA1P42261 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
GRIA1P42261 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GRIA1P42261 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
GRIA1P42261 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GRIA1P42261 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
GRIA1P42261 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GRIA1P42261 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.58■□□□□ 0.41
GRIA1P42261 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.58■□□□□ 0.41
GRIA1P42261 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
GRIA1P42261 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.58■□□□□ 0.4
GRIA1P42261 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GRIA1P42261 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.58■□□□□ 0.4
GRIA1P42261 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.58■□□□□ 0.4
GRIA1P42261 MINOS1P3-201ENST00000457048 203 ntBASIC17.58■□□□□ 0.4
GRIA1P42261 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.58■□□□□ 0.4
GRIA1P42261 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.58■□□□□ 0.4
GRIA1P42261 AC096582.2-201ENST00000510860 516 ntBASIC17.58■□□□□ 0.4
GRIA1P42261 STK19B-204ENST00000512515 211 ntBASIC17.58■□□□□ 0.4
GRIA1P42261 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.58■□□□□ 0.4
GRIA1P42261 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
GRIA1P42261 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.58■□□□□ 0.4
GRIA1P42261 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.58■□□□□ 0.4
GRIA1P42261 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.58■□□□□ 0.4
GRIA1P42261 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GRIA1P42261 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
GRIA1P42261 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GRIA1P42261 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.58■□□□□ 0.4
GRIA1P42261 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GRIA1P42261 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.58■□□□□ 0.4
GRIA1P42261 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GRIA1P42261 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
GRIA1P42261 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GRIA1P42261 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.57■□□□□ 0.4
GRIA1P42261 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.57■□□□□ 0.4
GRIA1P42261 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.57■□□□□ 0.4
GRIA1P42261 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
GRIA1P42261 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.57■□□□□ 0.4
GRIA1P42261 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.57■□□□□ 0.4
GRIA1P42261 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.57■□□□□ 0.4
GRIA1P42261 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.57■□□□□ 0.4
GRIA1P42261 AC074051.2-201ENST00000565115 352 ntBASIC17.57■□□□□ 0.4
GRIA1P42261 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 AL445228.2-201ENST00000605589 952 ntBASIC17.57■□□□□ 0.4
GRIA1P42261 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.57■□□□□ 0.4
GRIA1P42261 AC073592.5-201ENST00000624854 528 ntBASIC17.57■□□□□ 0.4
GRIA1P42261 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIA1P42261 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.57■□□□□ 0.4
GRIA1P42261 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms