Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HNF4AP41235 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HNF4AP41235 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HNF4AP41235 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HNF4AP41235 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HNF4AP41235 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HNF4AP41235 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.86■□□□□ 0.29
HNF4AP41235 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
HNF4AP41235 AC116353.5-201ENST00000638148 1699 ntBASIC16.85■□□□□ 0.29
HNF4AP41235 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HNF4AP41235 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.85■□□□□ 0.29
HNF4AP41235 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.85■□□□□ 0.29
HNF4AP41235 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.85■□□□□ 0.29
HNF4AP41235 RCN1P2-201ENST00000398357 915 ntBASIC16.85■□□□□ 0.29
HNF4AP41235 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
HNF4AP41235 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.85■□□□□ 0.29
HNF4AP41235 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.85■□□□□ 0.29
HNF4AP41235 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.85■□□□□ 0.29
HNF4AP41235 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.85■□□□□ 0.29
HNF4AP41235 AC012313.10-201ENST00000623509 926 ntBASIC16.85■□□□□ 0.29
HNF4AP41235 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.85■□□□□ 0.29
HNF4AP41235 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.85■□□□□ 0.29
HNF4AP41235 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.85■□□□□ 0.29
HNF4AP41235 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HNF4AP41235 KRT8P10-201ENST00000450021 1447 ntBASIC16.85■□□□□ 0.29
HNF4AP41235 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HNF4AP41235 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 AL353593.2-201ENST00000602529 1483 ntBASIC16.85■□□□□ 0.29
HNF4AP41235 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.85■□□□□ 0.29
HNF4AP41235 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HNF4AP41235 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HNF4AP41235 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HNF4AP41235 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
HNF4AP41235 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HNF4AP41235 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
HNF4AP41235 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HNF4AP41235 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.84■□□□□ 0.29
HNF4AP41235 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.84■□□□□ 0.29
HNF4AP41235 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HNF4AP41235 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.84■□□□□ 0.29
HNF4AP41235 PRELID1P1-202ENST00000567272 903 ntBASIC16.84■□□□□ 0.29
HNF4AP41235 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.84■□□□□ 0.29
HNF4AP41235 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.84■□□□□ 0.29
HNF4AP41235 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.84■□□□□ 0.29
HNF4AP41235 STK25P1-201ENST00000585406 838 ntBASIC16.84■□□□□ 0.29
HNF4AP41235 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.84■□□□□ 0.29
HNF4AP41235 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HNF4AP41235 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.84■□□□□ 0.29
HNF4AP41235 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.84■□□□□ 0.29
HNF4AP41235 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.84■□□□□ 0.29
HNF4AP41235 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.84■□□□□ 0.29
HNF4AP41235 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.84■□□□□ 0.29
HNF4AP41235 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.84■□□□□ 0.29
HNF4AP41235 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.84■□□□□ 0.29
HNF4AP41235 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 AC046185.3-201ENST00000623228 1824 ntBASIC16.84■□□□□ 0.29
HNF4AP41235 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HNF4AP41235 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.84■□□□□ 0.29
HNF4AP41235 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.84■□□□□ 0.29
HNF4AP41235 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.83■□□□□ 0.29
HNF4AP41235 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HNF4AP41235 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HNF4AP41235 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
HNF4AP41235 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HNF4AP41235 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HNF4AP41235 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HNF4AP41235 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HNF4AP41235 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.83■□□□□ 0.28
HNF4AP41235 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HNF4AP41235 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
HNF4AP41235 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms