Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
COL15A1P39059 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.85■■□□□ 1.09
COL15A1P39059 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
COL15A1P39059 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.85■■□□□ 1.09
COL15A1P39059 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.85■■□□□ 1.09
COL15A1P39059 Z92544.3-201ENST00000624747 417 ntBASIC21.85■■□□□ 1.09
COL15A1P39059 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.85■■□□□ 1.09
COL15A1P39059 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL15A1P39059 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL15A1P39059 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL15A1P39059 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL15A1P39059 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL15A1P39059 AC129492.6-201ENST00000611383 1305 ntBASIC21.84■■□□□ 1.09
COL15A1P39059 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
COL15A1P39059 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.84■■□□□ 1.09
COL15A1P39059 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL15A1P39059 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
COL15A1P39059 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
COL15A1P39059 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
COL15A1P39059 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL15A1P39059 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.84■■□□□ 1.09
COL15A1P39059 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.84■■□□□ 1.09
COL15A1P39059 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.84■■□□□ 1.09
COL15A1P39059 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.84■■□□□ 1.09
COL15A1P39059 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL15A1P39059 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL15A1P39059 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL15A1P39059 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.84■■□□□ 1.09
COL15A1P39059 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL15A1P39059 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL15A1P39059 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.84■■□□□ 1.09
COL15A1P39059 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL15A1P39059 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.83■■□□□ 1.09
COL15A1P39059 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL15A1P39059 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
COL15A1P39059 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.83■■□□□ 1.09
COL15A1P39059 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.83■■□□□ 1.09
COL15A1P39059 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL15A1P39059 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL15A1P39059 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
COL15A1P39059 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL15A1P39059 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.83■■□□□ 1.09
COL15A1P39059 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.83■■□□□ 1.09
COL15A1P39059 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL15A1P39059 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.83■■□□□ 1.09
COL15A1P39059 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
COL15A1P39059 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL15A1P39059 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL15A1P39059 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.83■■□□□ 1.08
COL15A1P39059 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.83■■□□□ 1.08
COL15A1P39059 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.83■■□□□ 1.08
COL15A1P39059 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.83■■□□□ 1.08
COL15A1P39059 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.83■■□□□ 1.08
COL15A1P39059 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.83■■□□□ 1.08
COL15A1P39059 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
COL15A1P39059 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL15A1P39059 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
COL15A1P39059 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
COL15A1P39059 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
COL15A1P39059 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
COL15A1P39059 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.83■■□□□ 1.08
COL15A1P39059 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL15A1P39059 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.82■■□□□ 1.08
COL15A1P39059 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
COL15A1P39059 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL15A1P39059 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL15A1P39059 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.82■■□□□ 1.08
COL15A1P39059 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
COL15A1P39059 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.82■■□□□ 1.08
COL15A1P39059 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.82■■□□□ 1.08
COL15A1P39059 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.82■■□□□ 1.08
COL15A1P39059 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.82■■□□□ 1.08
COL15A1P39059 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
COL15A1P39059 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL15A1P39059 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL15A1P39059 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL15A1P39059 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL15A1P39059 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.82■■□□□ 1.08
COL15A1P39059 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.82■■□□□ 1.08
COL15A1P39059 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL15A1P39059 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.82■■□□□ 1.08
COL15A1P39059 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.82■■□□□ 1.08
COL15A1P39059 AL139327.4-201ENST00000612362 153 ntBASIC21.82■■□□□ 1.08
COL15A1P39059 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.82■■□□□ 1.08
COL15A1P39059 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.82■■□□□ 1.08
COL15A1P39059 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL15A1P39059 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
COL15A1P39059 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL15A1P39059 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.82■■□□□ 1.08
COL15A1P39059 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.81■■□□□ 1.08
COL15A1P39059 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.81■■□□□ 1.08
COL15A1P39059 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 AC133963.1-201ENST00000504166 1679 ntBASIC21.81■■□□□ 1.08
COL15A1P39059 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.81■■□□□ 1.08
COL15A1P39059 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.81■■□□□ 1.08
COL15A1P39059 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms