Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.34□□□□□ -0.11
SNCAP37840 AC008550.1-201ENST00000511500 884 ntBASIC14.34□□□□□ -0.11
SNCAP37840 DUTP2-201ENST00000519164 463 ntBASIC14.34□□□□□ -0.11
SNCAP37840 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SNCAP37840 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.34□□□□□ -0.11
SNCAP37840 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.34□□□□□ -0.11
SNCAP37840 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 AP006294.2-201ENST00000641667 209 ntBASIC14.34□□□□□ -0.11
SNCAP37840 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.34□□□□□ -0.11
SNCAP37840 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SNCAP37840 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.34□□□□□ -0.11
SNCAP37840 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNCAP37840 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNCAP37840 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNCAP37840 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNCAP37840 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.33□□□□□ -0.11
SNCAP37840 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.33□□□□□ -0.11
SNCAP37840 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SNCAP37840 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNCAP37840 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.33□□□□□ -0.12
SNCAP37840 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.33□□□□□ -0.12
SNCAP37840 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 TSPY7P-201ENST00000431358 1114 ntBASIC14.33□□□□□ -0.12
SNCAP37840 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.33□□□□□ -0.12
SNCAP37840 EGLN1P1-201ENST00000531623 762 ntBASIC14.33□□□□□ -0.12
SNCAP37840 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.33□□□□□ -0.12
SNCAP37840 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.33□□□□□ -0.12
SNCAP37840 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.33□□□□□ -0.12
SNCAP37840 AC116407.2-201ENST00000613639 860 ntBASIC14.33□□□□□ -0.12
SNCAP37840 AC092865.7-201ENST00000641832 219 ntBASIC14.33□□□□□ -0.12
SNCAP37840 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNCAP37840 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SNCAP37840 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SNCAP37840 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SNCAP37840 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.33□□□□□ -0.12
SNCAP37840 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNCAP37840 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCAP37840 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 AC007950.2-201ENST00000615045 2347 ntBASIC14.32□□□□□ -0.12
SNCAP37840 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.32□□□□□ -0.12
SNCAP37840 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 AC007326.2-201ENST00000624224 7579 ntBASIC14.32□□□□□ -0.12
SNCAP37840 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.32□□□□□ -0.12
SNCAP37840 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.32□□□□□ -0.12
SNCAP37840 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.32□□□□□ -0.12
SNCAP37840 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.32□□□□□ -0.12
SNCAP37840 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.32□□□□□ -0.12
SNCAP37840 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.32□□□□□ -0.12
SNCAP37840 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.32□□□□□ -0.12
SNCAP37840 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SNCAP37840 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCAP37840 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SNCAP37840 AC022188.1-201ENST00000620960 1664 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms