Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFC4P35249 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.64■■□□□ 1.05
RFC4P35249 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RFC4P35249 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RFC4P35249 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.64■■□□□ 1.05
RFC4P35249 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.64■■□□□ 1.05
RFC4P35249 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.64■■□□□ 1.05
RFC4P35249 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.64■■□□□ 1.05
RFC4P35249 AL158211.3-201ENST00000607385 239 ntBASIC21.64■■□□□ 1.05
RFC4P35249 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.64■■□□□ 1.05
RFC4P35249 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.64■■□□□ 1.05
RFC4P35249 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFC4P35249 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
RFC4P35249 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFC4P35249 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFC4P35249 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFC4P35249 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RFC4P35249 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RFC4P35249 REXO1L11P-201ENST00000620964 1927 ntBASIC21.63■■□□□ 1.05
RFC4P35249 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.63■■□□□ 1.05
RFC4P35249 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.63■■□□□ 1.05
RFC4P35249 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.63■■□□□ 1.05
RFC4P35249 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
RFC4P35249 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 AL009183.1-201ENST00000603760 355 ntBASIC21.63■■□□□ 1.05
RFC4P35249 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.63■■□□□ 1.05
RFC4P35249 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.63■■□□□ 1.05
RFC4P35249 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.63■■□□□ 1.05
RFC4P35249 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.63■■□□□ 1.05
RFC4P35249 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFC4P35249 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC4P35249 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RFC4P35249 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.62■■□□□ 1.05
RFC4P35249 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC4P35249 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RFC4P35249 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RFC4P35249 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.62■■□□□ 1.05
RFC4P35249 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.62■■□□□ 1.05
RFC4P35249 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RFC4P35249 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RFC4P35249 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.62■■□□□ 1.05
RFC4P35249 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.62■■□□□ 1.05
RFC4P35249 AC097493.3-201ENST00000509725 367 ntBASIC21.62■■□□□ 1.05
RFC4P35249 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.62■■□□□ 1.05
RFC4P35249 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.62■■□□□ 1.05
RFC4P35249 AC069120.2-201ENST00000524091 540 ntBASIC21.62■■□□□ 1.05
RFC4P35249 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC4P35249 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.62■■□□□ 1.05
RFC4P35249 AL139327.4-201ENST00000612362 153 ntBASIC21.62■■□□□ 1.05
RFC4P35249 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.62■■□□□ 1.05
RFC4P35249 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RFC4P35249 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC4P35249 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFC4P35249 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.62■■□□□ 1.05
RFC4P35249 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.61■■□□□ 1.05
RFC4P35249 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RFC4P35249 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFC4P35249 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.61■■□□□ 1.05
RFC4P35249 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFC4P35249 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.61■■□□□ 1.05
RFC4P35249 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.61■■□□□ 1.05
RFC4P35249 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.61■■□□□ 1.05
RFC4P35249 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RFC4P35249 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.61■■□□□ 1.05
RFC4P35249 AP005018.1-201ENST00000525475 301 ntBASIC21.61■■□□□ 1.05
RFC4P35249 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.61■■□□□ 1.05
RFC4P35249 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 MIR6080-201ENST00000617359 66 ntBASIC21.61■■□□□ 1.05
RFC4P35249 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.61■■□□□ 1.05
RFC4P35249 AC084121.4-201ENST00000641598 221 ntBASIC21.61■■□□□ 1.05
RFC4P35249 AF228730.8-201ENST00000642140 221 ntBASIC21.61■■□□□ 1.05
RFC4P35249 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RFC4P35249 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC4P35249 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC4P35249 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RFC4P35249 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RFC4P35249 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms