Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HTR1EP28566 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HTR1EP28566 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HTR1EP28566 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HTR1EP28566 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HTR1EP28566 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 AL022342.1-201ENST00000400363 863 ntBASIC16.65■□□□□ 0.26
HTR1EP28566 AP002383.4-201ENST00000442518 975 ntBASIC16.65■□□□□ 0.26
HTR1EP28566 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.65■□□□□ 0.26
HTR1EP28566 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1EP28566 AC009078.2-202ENST00000463353 338 ntBASIC16.65■□□□□ 0.26
HTR1EP28566 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1EP28566 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.65■□□□□ 0.26
HTR1EP28566 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.65■□□□□ 0.26
HTR1EP28566 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HTR1EP28566 MIR3917-201ENST00000580971 93 ntBASIC16.65■□□□□ 0.26
HTR1EP28566 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.65■□□□□ 0.26
HTR1EP28566 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1EP28566 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.65■□□□□ 0.26
HTR1EP28566 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HTR1EP28566 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1EP28566 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1EP28566 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.65■□□□□ 0.26
HTR1EP28566 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1EP28566 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
HTR1EP28566 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 BX276092.7-203ENST00000637198 1536 ntBASIC16.65■□□□□ 0.26
HTR1EP28566 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HTR1EP28566 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1EP28566 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HTR1EP28566 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HTR1EP28566 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.64■□□□□ 0.25
HTR1EP28566 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.64■□□□□ 0.25
HTR1EP28566 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.64■□□□□ 0.25
HTR1EP28566 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HTR1EP28566 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HTR1EP28566 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HTR1EP28566 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HTR1EP28566 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.64■□□□□ 0.25
HTR1EP28566 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.64■□□□□ 0.25
HTR1EP28566 EMBP1-201ENST00000458200 901 ntBASIC16.64■□□□□ 0.25
HTR1EP28566 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.64■□□□□ 0.25
HTR1EP28566 LINC01711-201ENST00000598340 967 ntBASIC16.64■□□□□ 0.25
HTR1EP28566 AC024243.1-201ENST00000609234 778 ntBASIC16.64■□□□□ 0.25
HTR1EP28566 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.64■□□□□ 0.25
HTR1EP28566 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.64■□□□□ 0.25
HTR1EP28566 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.64■□□□□ 0.25
HTR1EP28566 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HTR1EP28566 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HTR1EP28566 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HTR1EP28566 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1EP28566 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1EP28566 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1EP28566 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1EP28566 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1EP28566 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1EP28566 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.63■□□□□ 0.25
HTR1EP28566 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.63■□□□□ 0.25
HTR1EP28566 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms