Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL1P22362 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCL1P22362 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL1P22362 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCL1P22362 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CCL1P22362 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCL1P22362 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL1P22362 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCL1P22362 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CCL1P22362 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.93□□□□□ -0.02
CCL1P22362 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL1P22362 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CCL1P22362 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL1P22362 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL1P22362 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
CCL1P22362 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.92□□□□□ -0.02
CCL1P22362 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CCL1P22362 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.92□□□□□ -0.02
CCL1P22362 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCL1P22362 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 TSSC2-201ENST00000450217 709 ntBASIC14.92□□□□□ -0.02
CCL1P22362 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.92□□□□□ -0.02
CCL1P22362 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.92□□□□□ -0.02
CCL1P22362 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.92□□□□□ -0.02
CCL1P22362 TPSP2-201ENST00000561760 610 ntBASIC14.92□□□□□ -0.02
CCL1P22362 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.92□□□□□ -0.02
CCL1P22362 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.92□□□□□ -0.02
CCL1P22362 Z69720.1-201ENST00000601483 472 ntBASIC14.92□□□□□ -0.02
CCL1P22362 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.92□□□□□ -0.02
CCL1P22362 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CCL1P22362 PMPCAP1-201ENST00000508114 1576 ntBASIC14.92□□□□□ -0.02
CCL1P22362 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.92□□□□□ -0.02
CCL1P22362 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.92□□□□□ -0.02
CCL1P22362 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CCL1P22362 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.92□□□□□ -0.02
CCL1P22362 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CCL1P22362 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.92□□□□□ -0.02
CCL1P22362 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL1P22362 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.92□□□□□ -0.02
CCL1P22362 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL1P22362 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 PCDHA14-201ENST00000506751 2298 ntBASIC14.91□□□□□ -0.02
CCL1P22362 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CCL1P22362 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCL1P22362 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCL1P22362 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CCL1P22362 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms