Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDH3P22223 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDH3P22223 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDH3P22223 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH3P22223 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CDH3P22223 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDH3P22223 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH3P22223 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH3P22223 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CDH3P22223 AC012317.2-201ENST00000623305 2251 ntBASIC17.05■□□□□ 0.32
CDH3P22223 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CDH3P22223 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH3P22223 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH3P22223 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH3P22223 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH3P22223 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH3P22223 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH3P22223 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH3P22223 FDX1P1-201ENST00000449115 551 ntBASIC17.05■□□□□ 0.32
CDH3P22223 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH3P22223 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.05■□□□□ 0.32
CDH3P22223 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.05■□□□□ 0.32
CDH3P22223 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 AL355877.3-201ENST00000622820 899 ntBASIC17.05■□□□□ 0.32
CDH3P22223 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH3P22223 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH3P22223 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH3P22223 FLJ13224-201ENST00000313737 1514 ntBASIC17.05■□□□□ 0.32
CDH3P22223 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH3P22223 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH3P22223 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH3P22223 AP005117.1-201ENST00000584346 1413 ntBASIC17.04■□□□□ 0.32
CDH3P22223 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH3P22223 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDH3P22223 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDH3P22223 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CDH3P22223 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH3P22223 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 FAM197Y8-203ENST00000450145 560 ntBASIC17.04■□□□□ 0.32
CDH3P22223 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CDH3P22223 AC122714.2-201ENST00000502787 707 ntBASIC17.04■□□□□ 0.32
CDH3P22223 AC106795.1-205ENST00000512851 1056 ntBASIC17.04■□□□□ 0.32
CDH3P22223 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH3P22223 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH3P22223 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CDH3P22223 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH3P22223 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH3P22223 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH3P22223 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 AD000864.1-201ENST00000624076 2295 ntBASIC17.04■□□□□ 0.32
CDH3P22223 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH3P22223 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH3P22223 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH3P22223 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH3P22223 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms