Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.16■□□□□ 0.18
TNFRSF1BP20333 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 AC002558.1-201ENST00000488906 803 ntBASIC16.16■□□□□ 0.18
TNFRSF1BP20333 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.16■□□□□ 0.18
TNFRSF1BP20333 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 AC073508.3-201ENST00000619697 1419 ntBASIC16.16■□□□□ 0.18
TNFRSF1BP20333 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 COX5BP2-201ENST00000392354 334 ntBASIC16.15■□□□□ 0.18
TNFRSF1BP20333 AC005521.1-201ENST00000393351 872 ntBASIC16.15■□□□□ 0.18
TNFRSF1BP20333 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 HYMAI.1-201ENST00000620949 238 ntBASIC16.15■□□□□ 0.18
TNFRSF1BP20333 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF1BP20333 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TNFRSF1BP20333 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 SPDYE13P-201ENST00000445314 798 ntBASIC16.14■□□□□ 0.17
TNFRSF1BP20333 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 AC109462.3-201ENST00000573934 613 ntBASIC16.14■□□□□ 0.17
TNFRSF1BP20333 AC012306.2-201ENST00000609350 630 ntBASIC16.14■□□□□ 0.17
TNFRSF1BP20333 AC019129.2-201ENST00000609837 1235 ntBASIC16.14■□□□□ 0.17
TNFRSF1BP20333 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 AC078925.2-201ENST00000624013 1973 ntBASIC16.14■□□□□ 0.17
TNFRSF1BP20333 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.14■□□□□ 0.17
TNFRSF1BP20333 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms