Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2CP19387 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2CP19387 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
POLR2CP19387 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
POLR2CP19387 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2CP19387 AC141586.5-201ENST00000624546 2050 ntBASIC16.84■□□□□ 0.29
POLR2CP19387 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
POLR2CP19387 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2CP19387 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2CP19387 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.84■□□□□ 0.29
POLR2CP19387 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLR2CP19387 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLR2CP19387 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.83■□□□□ 0.29
POLR2CP19387 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLR2CP19387 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
POLR2CP19387 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.83■□□□□ 0.28
POLR2CP19387 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.83■□□□□ 0.28
POLR2CP19387 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
POLR2CP19387 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR2CP19387 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.83■□□□□ 0.28
POLR2CP19387 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.83■□□□□ 0.28
POLR2CP19387 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR2CP19387 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
POLR2CP19387 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR2CP19387 AP002414.3-201ENST00000589352 1468 ntBASIC16.83■□□□□ 0.28
POLR2CP19387 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.83■□□□□ 0.28
POLR2CP19387 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR2CP19387 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
POLR2CP19387 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.83■□□□□ 0.28
POLR2CP19387 AC134043.2-201ENST00000624206 2238 ntBASIC16.83■□□□□ 0.28
POLR2CP19387 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
POLR2CP19387 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2CP19387 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR2CP19387 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR2CP19387 AC097637.2-201ENST00000624096 1997 ntBASIC16.82■□□□□ 0.28
POLR2CP19387 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
POLR2CP19387 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR2CP19387 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR2CP19387 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.82■□□□□ 0.28
POLR2CP19387 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.82■□□□□ 0.28
POLR2CP19387 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR2CP19387 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 AL139327.4-201ENST00000612362 153 ntBASIC16.82■□□□□ 0.28
POLR2CP19387 AL589182.2-201ENST00000619332 1049 ntBASIC16.82■□□□□ 0.28
POLR2CP19387 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.82■□□□□ 0.28
POLR2CP19387 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
POLR2CP19387 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
POLR2CP19387 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR2CP19387 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2CP19387 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
POLR2CP19387 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR2CP19387 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2CP19387 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
POLR2CP19387 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2CP19387 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2CP19387 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2CP19387 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
POLR2CP19387 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2CP19387 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2CP19387 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2CP19387 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.81■□□□□ 0.28
POLR2CP19387 AC098831.1-202ENST00000438821 336 ntBASIC16.81■□□□□ 0.28
POLR2CP19387 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.81■□□□□ 0.28
POLR2CP19387 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR2CP19387 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.81■□□□□ 0.28
POLR2CP19387 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms