Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
VCLP18206 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.51■□□□□ 0.39
VCLP18206 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
VCLP18206 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
VCLP18206 TP73-AS1-210ENST00000637775 1455 ntBASIC17.5■□□□□ 0.39
VCLP18206 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VCLP18206 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VCLP18206 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.5■□□□□ 0.39
VCLP18206 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VCLP18206 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.5■□□□□ 0.39
VCLP18206 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.5■□□□□ 0.39
VCLP18206 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.5■□□□□ 0.39
VCLP18206 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.5■□□□□ 0.39
VCLP18206 BNIP3P18-201ENST00000593976 575 ntBASIC17.5■□□□□ 0.39
VCLP18206 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VCLP18206 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.5■□□□□ 0.39
VCLP18206 CICP6-201ENST00000457191 2729 ntBASIC17.5■□□□□ 0.39
VCLP18206 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.5■□□□□ 0.39
VCLP18206 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VCLP18206 AP001094.4-201ENST00000579008 2176 ntBASIC17.5■□□□□ 0.39
VCLP18206 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
VCLP18206 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VCLP18206 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCLP18206 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VCLP18206 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.49■□□□□ 0.39
VCLP18206 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
VCLP18206 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.49■□□□□ 0.39
VCLP18206 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.49■□□□□ 0.39
VCLP18206 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.49■□□□□ 0.39
VCLP18206 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.49■□□□□ 0.39
VCLP18206 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.49■□□□□ 0.39
VCLP18206 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.49■□□□□ 0.39
VCLP18206 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
VCLP18206 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.49■□□□□ 0.39
VCLP18206 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VCLP18206 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.49■□□□□ 0.39
VCLP18206 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
VCLP18206 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCLP18206 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.48■□□□□ 0.39
VCLP18206 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCLP18206 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.48■□□□□ 0.39
VCLP18206 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.48■□□□□ 0.39
VCLP18206 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VCLP18206 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCLP18206 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VCLP18206 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCLP18206 FAM220CP-201ENST00000395253 831 ntBASIC17.48■□□□□ 0.39
VCLP18206 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.48■□□□□ 0.39
VCLP18206 AC096633.1-201ENST00000422446 749 ntBASIC17.48■□□□□ 0.39
VCLP18206 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.48■□□□□ 0.39
VCLP18206 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.48■□□□□ 0.39
VCLP18206 TPM4P1-201ENST00000436100 807 ntBASIC17.48■□□□□ 0.39
VCLP18206 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCLP18206 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.48■□□□□ 0.39
VCLP18206 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.48■□□□□ 0.39
VCLP18206 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
VCLP18206 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VCLP18206 AL591684.3-201ENST00000605187 298 ntBASIC17.48■□□□□ 0.39
VCLP18206 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.48■□□□□ 0.39
VCLP18206 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.48■□□□□ 0.39
VCLP18206 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.48■□□□□ 0.39
VCLP18206 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.48■□□□□ 0.39
VCLP18206 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VCLP18206 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCLP18206 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCLP18206 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms