Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 AC096633.1-201ENST00000422446 749 ntBASIC19.18■□□□□ 0.66
ATP2A2P16615 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP2A2P16615 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.18■□□□□ 0.66
ATP2A2P16615 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.18■□□□□ 0.66
ATP2A2P16615 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2A2P16615 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ATP2A2P16615 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
ATP2A2P16615 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2A2P16615 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2A2P16615 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 ABALON-201ENST00000629058 1903 ntBASIC19.17■□□□□ 0.66
ATP2A2P16615 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ATP2A2P16615 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2A2P16615 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 AL020989.1-201ENST00000422979 469 ntBASIC19.17■□□□□ 0.66
ATP2A2P16615 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ATP2A2P16615 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2A2P16615 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2A2P16615 COX20P2-201ENST00000452636 358 ntBASIC19.17■□□□□ 0.66
ATP2A2P16615 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.17■□□□□ 0.66
ATP2A2P16615 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.17■□□□□ 0.66
ATP2A2P16615 IGHV3-65-201ENST00000523210 341 ntBASIC19.17■□□□□ 0.66
ATP2A2P16615 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP2A2P16615 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ATP2A2P16615 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A2P16615 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ATP2A2P16615 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2A2P16615 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A2P16615 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATP2A2P16615 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ATP2A2P16615 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A2P16615 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A2P16615 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP2A2P16615 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A2P16615 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A2P16615 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A2P16615 TSEN15P1-201ENST00000423257 515 ntBASIC19.16■□□□□ 0.66
ATP2A2P16615 AC103564.2-201ENST00000432853 1299 ntBASIC19.16■□□□□ 0.66
ATP2A2P16615 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A2P16615 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.16■□□□□ 0.66
ATP2A2P16615 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP2A2P16615 AL031432.2-201ENST00000566714 459 ntBASIC19.16■□□□□ 0.66
ATP2A2P16615 AL928711.1-201ENST00000570165 459 ntBASIC19.16■□□□□ 0.66
ATP2A2P16615 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2A2P16615 AC008667.4-201ENST00000607370 168 ntBASIC19.16■□□□□ 0.66
ATP2A2P16615 AC004790.2-201ENST00000623588 572 ntBASIC19.16■□□□□ 0.66
ATP2A2P16615 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A2P16615 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A2P16615 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ATP2A2P16615 AC068880.1-201ENST00000507289 2297 ntBASIC19.16■□□□□ 0.66
ATP2A2P16615 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A2P16615 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A2P16615 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A2P16615 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A2P16615 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A2P16615 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A2P16615 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A2P16615 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A2P16615 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2A2P16615 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A2P16615 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.15■□□□□ 0.66
ATP2A2P16615 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.15■□□□□ 0.66
ATP2A2P16615 RPS15P9-201ENST00000494093 319 ntBASIC19.15■□□□□ 0.66
ATP2A2P16615 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP2A2P16615 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP2A2P16615 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ATP2A2P16615 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP2A2P16615 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2A2P16615 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2A2P16615 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms