Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 IGHGP-201ENST00000390555 1178 ntBASIC14.75□□□□□ -0.05
HIST1H1DP16402 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 AC068472.1-201ENST00000474589 881 ntBASIC14.75□□□□□ -0.05
HIST1H1DP16402 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 AL023973.1-201ENST00000624619 620 ntBASIC14.75□□□□□ -0.05
HIST1H1DP16402 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.75□□□□□ -0.05
HIST1H1DP16402 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 AC046158.3-201ENST00000624947 2558 ntBASIC14.75□□□□□ -0.05
HIST1H1DP16402 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HIST1H1DP16402 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1DP16402 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 AL353692.3-201ENST00000407031 1396 ntBASIC14.74□□□□□ -0.05
HIST1H1DP16402 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 AL138966.2-201ENST00000621997 464 ntBASIC14.74□□□□□ -0.05
HIST1H1DP16402 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1DP16402 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H1DP16402 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1DP16402 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1DP16402 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1DP16402 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1DP16402 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1DP16402 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1DP16402 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1DP16402 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H1DP16402 AC092068.3-201ENST00000587894 2016 ntBASIC14.73□□□□□ -0.05
HIST1H1DP16402 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
HIST1H1DP16402 FER1L4-210ENST00000615531 5998 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms