Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ECEL1P2-202ENST00000465689 757 ntBASIC16.44■□□□□ 0.22
NCK1P16333 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.44■□□□□ 0.22
NCK1P16333 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
NCK1P16333 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.44■□□□□ 0.22
NCK1P16333 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.44■□□□□ 0.22
NCK1P16333 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.44■□□□□ 0.22
NCK1P16333 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.44■□□□□ 0.22
NCK1P16333 FAM87A-204ENST00000613235 858 ntBASIC16.44■□□□□ 0.22
NCK1P16333 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.44■□□□□ 0.22
NCK1P16333 AC009154.2-201ENST00000621177 724 ntBASIC16.44■□□□□ 0.22
NCK1P16333 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.44■□□□□ 0.22
NCK1P16333 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.44■□□□□ 0.22
NCK1P16333 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.44■□□□□ 0.22
NCK1P16333 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NCK1P16333 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NCK1P16333 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 AC132872.4-202ENST00000622924 2756 ntBASIC16.43■□□□□ 0.22
NCK1P16333 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.43■□□□□ 0.22
NCK1P16333 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.43■□□□□ 0.22
NCK1P16333 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.43■□□□□ 0.22
NCK1P16333 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NCK1P16333 TSPY12P-201ENST00000421279 868 ntBASIC16.43■□□□□ 0.22
NCK1P16333 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.43■□□□□ 0.22
NCK1P16333 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.43■□□□□ 0.22
NCK1P16333 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.43■□□□□ 0.22
NCK1P16333 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.43■□□□□ 0.22
NCK1P16333 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NCK1P16333 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.43■□□□□ 0.22
NCK1P16333 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.43■□□□□ 0.22
NCK1P16333 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.43■□□□□ 0.22
NCK1P16333 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.43■□□□□ 0.22
NCK1P16333 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCK1P16333 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NCK1P16333 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.42■□□□□ 0.22
NCK1P16333 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.42■□□□□ 0.22
NCK1P16333 KRT89P-201ENST00000620027 1478 ntBASIC16.42■□□□□ 0.22
NCK1P16333 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.42■□□□□ 0.22
NCK1P16333 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 AC026691.1-201ENST00000602502 2017 ntBASIC16.42■□□□□ 0.22
NCK1P16333 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NCK1P16333 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.42■□□□□ 0.22
NCK1P16333 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.42■□□□□ 0.22
NCK1P16333 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.42■□□□□ 0.22
NCK1P16333 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.42■□□□□ 0.22
NCK1P16333 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.42■□□□□ 0.22
NCK1P16333 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.42■□□□□ 0.22
NCK1P16333 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NCK1P16333 AC010947.1-201ENST00000623454 693 ntBASIC16.42■□□□□ 0.22
NCK1P16333 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.42■□□□□ 0.22
NCK1P16333 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.42■□□□□ 0.22
NCK1P16333 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.42■□□□□ 0.22
NCK1P16333 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NCK1P16333 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.42■□□□□ 0.22
NCK1P16333 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NCK1P16333 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.42■□□□□ 0.22
NCK1P16333 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.42■□□□□ 0.22
NCK1P16333 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCK1P16333 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NCK1P16333 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms