Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBL4AP11441 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.11■□□□□ 0.17
UBL4AP11441 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 PP12613-201ENST00000424958 2230 ntBASIC16.11■□□□□ 0.17
UBL4AP11441 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.1■□□□□ 0.17
UBL4AP11441 TCAF2P1-201ENST00000291129 2421 ntBASIC16.1■□□□□ 0.17
UBL4AP11441 TP73-AS1-210ENST00000637775 1455 ntBASIC16.1■□□□□ 0.17
UBL4AP11441 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.1■□□□□ 0.17
UBL4AP11441 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.1■□□□□ 0.17
UBL4AP11441 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.1■□□□□ 0.17
UBL4AP11441 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.1■□□□□ 0.17
UBL4AP11441 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
UBL4AP11441 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
UBL4AP11441 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.1■□□□□ 0.17
UBL4AP11441 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.1■□□□□ 0.17
UBL4AP11441 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBL4AP11441 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.1■□□□□ 0.17
UBL4AP11441 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.1■□□□□ 0.17
UBL4AP11441 AC111152.3-201ENST00000569699 673 ntBASIC16.1■□□□□ 0.17
UBL4AP11441 AC109462.3-201ENST00000573934 613 ntBASIC16.1■□□□□ 0.17
UBL4AP11441 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.1■□□□□ 0.17
UBL4AP11441 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 AC011467.2-201ENST00000598425 242 ntBASIC16.1■□□□□ 0.17
UBL4AP11441 AC019129.2-201ENST00000609837 1235 ntBASIC16.1■□□□□ 0.17
UBL4AP11441 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
UBL4AP11441 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.1■□□□□ 0.17
UBL4AP11441 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
UBL4AP11441 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.1■□□□□ 0.17
UBL4AP11441 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
UBL4AP11441 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBL4AP11441 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
UBL4AP11441 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UBL4AP11441 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.09■□□□□ 0.17
UBL4AP11441 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.09■□□□□ 0.17
UBL4AP11441 AL023806.1-201ENST00000603994 1649 ntBASIC16.09■□□□□ 0.17
UBL4AP11441 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 LYSMD4-203ENST00000378904 2122 ntBASIC16.09■□□□□ 0.17
UBL4AP11441 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
UBL4AP11441 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
UBL4AP11441 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.09■□□□□ 0.17
UBL4AP11441 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.09■□□□□ 0.17
UBL4AP11441 IGHV3-47-201ENST00000425060 335 ntBASIC16.09■□□□□ 0.17
UBL4AP11441 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.09■□□□□ 0.17
UBL4AP11441 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.09■□□□□ 0.17
UBL4AP11441 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.09■□□□□ 0.17
UBL4AP11441 AL139327.4-201ENST00000612362 153 ntBASIC16.09■□□□□ 0.17
UBL4AP11441 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.09■□□□□ 0.17
UBL4AP11441 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.09■□□□□ 0.17
UBL4AP11441 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UBL4AP11441 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.09■□□□□ 0.17
UBL4AP11441 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UBL4AP11441 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL4AP11441 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.09■□□□□ 0.17
UBL4AP11441 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
UBL4AP11441 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.08■□□□□ 0.17
UBL4AP11441 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBL4AP11441 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBL4AP11441 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms