Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.59□□□□□ -0.23
CD28P10747 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD28P10747 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CD28P10747 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CD28P10747 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD28P10747 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.58□□□□□ -0.23
CD28P10747 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CD28P10747 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.23
CD28P10747 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CD28P10747 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.58□□□□□ -0.23
CD28P10747 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.58□□□□□ -0.23
CD28P10747 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CD28P10747 AC097637.2-201ENST00000624096 1997 ntBASIC13.58□□□□□ -0.24
CD28P10747 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 AC009113.1-201ENST00000570267 2443 ntBASIC13.58□□□□□ -0.24
CD28P10747 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.58□□□□□ -0.24
CD28P10747 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.58□□□□□ -0.24
CD28P10747 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.58□□□□□ -0.24
CD28P10747 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.58□□□□□ -0.24
CD28P10747 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.58□□□□□ -0.24
CD28P10747 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.58□□□□□ -0.24
CD28P10747 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
CD28P10747 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
CD28P10747 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.58□□□□□ -0.24
CD28P10747 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.58□□□□□ -0.24
CD28P10747 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CD28P10747 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CD28P10747 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
CD28P10747 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CD28P10747 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD28P10747 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
CD28P10747 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.57□□□□□ -0.24
CD28P10747 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.57□□□□□ -0.24
CD28P10747 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CD28P10747 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.57□□□□□ -0.24
CD28P10747 AC018470.1-201ENST00000624790 3129 ntBASIC13.57□□□□□ -0.24
CD28P10747 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD28P10747 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
CD28P10747 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD28P10747 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.57□□□□□ -0.24
CD28P10747 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.57□□□□□ -0.24
CD28P10747 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.57□□□□□ -0.24
CD28P10747 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.57□□□□□ -0.24
CD28P10747 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.57□□□□□ -0.24
CD28P10747 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.57□□□□□ -0.24
CD28P10747 MTDHP5-201ENST00000598980 586 ntBASIC13.57□□□□□ -0.24
CD28P10747 AC004790.2-201ENST00000623588 572 ntBASIC13.57□□□□□ -0.24
CD28P10747 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CD28P10747 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.57□□□□□ -0.24
CD28P10747 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.57□□□□□ -0.24
CD28P10747 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CD28P10747 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.57□□□□□ -0.24
CD28P10747 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.57□□□□□ -0.24
CD28P10747 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD28P10747 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms