Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.99■□□□□ 0.47
CD48P09326 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.99■□□□□ 0.47
CD48P09326 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.99■□□□□ 0.47
CD48P09326 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.99■□□□□ 0.47
CD48P09326 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.99■□□□□ 0.47
CD48P09326 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CD48P09326 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CD48P09326 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CD48P09326 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.99■□□□□ 0.47
CD48P09326 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CD48P09326 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.99■□□□□ 0.47
CD48P09326 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.99■□□□□ 0.47
CD48P09326 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
CD48P09326 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.99■□□□□ 0.47
CD48P09326 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CD48P09326 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CD48P09326 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.98■□□□□ 0.47
CD48P09326 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CD48P09326 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.98■□□□□ 0.47
CD48P09326 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CD48P09326 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.98■□□□□ 0.47
CD48P09326 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.98■□□□□ 0.47
CD48P09326 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.98■□□□□ 0.47
CD48P09326 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.98■□□□□ 0.47
CD48P09326 FOSL1P1-201ENST00000511041 816 ntBASIC17.98■□□□□ 0.47
CD48P09326 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.98■□□□□ 0.47
CD48P09326 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.98■□□□□ 0.47
CD48P09326 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.98■□□□□ 0.47
CD48P09326 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.98■□□□□ 0.47
CD48P09326 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CD48P09326 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CD48P09326 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD48P09326 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CD48P09326 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CD48P09326 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CD48P09326 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 AC084018.2-201ENST00000613093 2607 ntBASIC17.97■□□□□ 0.47
CD48P09326 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CD48P09326 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CD48P09326 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.97■□□□□ 0.47
CD48P09326 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CD48P09326 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.97■□□□□ 0.47
CD48P09326 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.97■□□□□ 0.47
CD48P09326 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.97■□□□□ 0.47
CD48P09326 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.97■□□□□ 0.47
CD48P09326 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.97■□□□□ 0.47
CD48P09326 AC092068.3-201ENST00000587894 2016 ntBASIC17.97■□□□□ 0.47
CD48P09326 AC005915.1-201ENST00000624912 2018 ntBASIC17.97■□□□□ 0.47
CD48P09326 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CD48P09326 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CD48P09326 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CD48P09326 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CD48P09326 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.97■□□□□ 0.47
CD48P09326 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD48P09326 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CD48P09326 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.96■□□□□ 0.47
CD48P09326 TNRC18P3-201ENST00000441896 2691 ntBASIC17.96■□□□□ 0.47
CD48P09326 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms