Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.17■□□□□ 0.5
LMNAP02545 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LMNAP02545 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.17■□□□□ 0.5
LMNAP02545 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LMNAP02545 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.17■□□□□ 0.5
LMNAP02545 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.17■□□□□ 0.5
LMNAP02545 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.17■□□□□ 0.5
LMNAP02545 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.17■□□□□ 0.5
LMNAP02545 AC105339.3-201ENST00000560043 636 ntBASIC18.17■□□□□ 0.5
LMNAP02545 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.17■□□□□ 0.5
LMNAP02545 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.17■□□□□ 0.5
LMNAP02545 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.17■□□□□ 0.5
LMNAP02545 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMNAP02545 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.16■□□□□ 0.5
LMNAP02545 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.16■□□□□ 0.5
LMNAP02545 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.16■□□□□ 0.5
LMNAP02545 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LMNAP02545 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.16■□□□□ 0.5
LMNAP02545 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LMNAP02545 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LMNAP02545 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.16■□□□□ 0.5
LMNAP02545 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LMNAP02545 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.16■□□□□ 0.5
LMNAP02545 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.16■□□□□ 0.5
LMNAP02545 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.16■□□□□ 0.5
LMNAP02545 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.16■□□□□ 0.5
LMNAP02545 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.16■□□□□ 0.5
LMNAP02545 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.16■□□□□ 0.5
LMNAP02545 AP002472.1-201ENST00000577490 586 ntBASIC18.16■□□□□ 0.5
LMNAP02545 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.16■□□□□ 0.5
LMNAP02545 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.16■□□□□ 0.5
LMNAP02545 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.16■□□□□ 0.5
LMNAP02545 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.16■□□□□ 0.5
LMNAP02545 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LMNAP02545 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMNAP02545 AC034236.2-201ENST00000606662 1610 ntBASIC18.16■□□□□ 0.5
LMNAP02545 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.15■□□□□ 0.5
LMNAP02545 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.15■□□□□ 0.5
LMNAP02545 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 FEM1AP3-201ENST00000403722 1741 ntBASIC18.15■□□□□ 0.5
LMNAP02545 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
LMNAP02545 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LMNAP02545 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LMNAP02545 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LMNAP02545 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.15■□□□□ 0.5
LMNAP02545 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.15■□□□□ 0.5
LMNAP02545 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.15■□□□□ 0.5
LMNAP02545 AC005336.2-201ENST00000593183 939 ntBASIC18.15■□□□□ 0.5
LMNAP02545 AC106028.4-201ENST00000614509 607 ntBASIC18.15■□□□□ 0.5
LMNAP02545 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.15■□□□□ 0.5
LMNAP02545 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LMNAP02545 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMNAP02545 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.15■□□□□ 0.5
LMNAP02545 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms