Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.47■□□□□ 0.07
CNOT4O95628 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CNOT4O95628 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CNOT4O95628 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CNOT4O95628 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT4O95628 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT4O95628 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CNOT4O95628 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.46■□□□□ 0.07
CNOT4O95628 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CNOT4O95628 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT4O95628 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT4O95628 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CNOT4O95628 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.46■□□□□ 0.07
CNOT4O95628 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT4O95628 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
CNOT4O95628 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.46■□□□□ 0.07
CNOT4O95628 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CNOT4O95628 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CNOT4O95628 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.46■□□□□ 0.07
CNOT4O95628 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT4O95628 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.46■□□□□ 0.07
CNOT4O95628 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.46■□□□□ 0.07
CNOT4O95628 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT4O95628 AC109462.3-201ENST00000573934 613 ntBASIC15.46■□□□□ 0.07
CNOT4O95628 STK25P1-201ENST00000585406 838 ntBASIC15.46■□□□□ 0.07
CNOT4O95628 TP73-AS1-207ENST00000624167 988 ntBASIC15.46■□□□□ 0.07
CNOT4O95628 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.46■□□□□ 0.07
CNOT4O95628 AL022326.1-202ENST00000641533 845 ntBASIC15.46■□□□□ 0.07
CNOT4O95628 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CNOT4O95628 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CNOT4O95628 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CNOT4O95628 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT4O95628 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CNOT4O95628 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CNOT4O95628 SIRPAP1-201ENST00000448467 1770 ntBASIC15.46■□□□□ 0.07
CNOT4O95628 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT4O95628 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT4O95628 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.46■□□□□ 0.07
CNOT4O95628 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
CNOT4O95628 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CNOT4O95628 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.46■□□□□ 0.06
CNOT4O95628 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CNOT4O95628 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.46■□□□□ 0.06
CNOT4O95628 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CNOT4O95628 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT4O95628 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT4O95628 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CNOT4O95628 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.45■□□□□ 0.06
CNOT4O95628 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT4O95628 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CNOT4O95628 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT4O95628 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CNOT4O95628 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CNOT4O95628 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.45■□□□□ 0.06
CNOT4O95628 KLF4P1-201ENST00000412782 1185 ntBASIC15.45■□□□□ 0.06
CNOT4O95628 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.45■□□□□ 0.06
CNOT4O95628 SIGLEC30P-201ENST00000455569 941 ntBASIC15.45■□□□□ 0.06
CNOT4O95628 AC018712.1-201ENST00000455767 687 ntBASIC15.45■□□□□ 0.06
CNOT4O95628 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CNOT4O95628 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 RNPS1P1-201ENST00000507437 918 ntBASIC15.45■□□□□ 0.06
CNOT4O95628 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.45■□□□□ 0.06
CNOT4O95628 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT4O95628 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT4O95628 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.45■□□□□ 0.06
CNOT4O95628 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT4O95628 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT4O95628 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
CNOT4O95628 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT4O95628 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT4O95628 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT4O95628 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT4O95628 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CNOT4O95628 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT4O95628 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms