Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCA1O95477 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCA1O95477 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.56□□□□□ -0.08
ABCA1O95477 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ABCA1O95477 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ABCA1O95477 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.56□□□□□ -0.08
ABCA1O95477 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.56□□□□□ -0.08
ABCA1O95477 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ABCA1O95477 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.55□□□□□ -0.08
ABCA1O95477 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.55□□□□□ -0.08
ABCA1O95477 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ABCA1O95477 AC106028.4-201ENST00000614509 607 ntBASIC14.55□□□□□ -0.08
ABCA1O95477 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.55□□□□□ -0.08
ABCA1O95477 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.55□□□□□ -0.08
ABCA1O95477 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.55□□□□□ -0.08
ABCA1O95477 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ABCA1O95477 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
ABCA1O95477 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ABCA1O95477 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ABCA1O95477 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.55□□□□□ -0.08
ABCA1O95477 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ABCA1O95477 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.55□□□□□ -0.08
ABCA1O95477 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 AC010654.1-201ENST00000615722 808 ntBASIC14.55□□□□□ -0.08
ABCA1O95477 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.55□□□□□ -0.08
ABCA1O95477 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ABCA1O95477 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.55□□□□□ -0.08
ABCA1O95477 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
ABCA1O95477 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ABCA1O95477 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ABCA1O95477 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ABCA1O95477 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 AC122714.2-201ENST00000502787 707 ntBASIC14.54□□□□□ -0.08
ABCA1O95477 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ABCA1O95477 AP002472.1-201ENST00000577490 586 ntBASIC14.54□□□□□ -0.08
ABCA1O95477 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.54□□□□□ -0.08
ABCA1O95477 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.54□□□□□ -0.08
ABCA1O95477 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
ABCA1O95477 AC005593.1-201ENST00000624894 515 ntBASIC14.54□□□□□ -0.08
ABCA1O95477 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
ABCA1O95477 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 BICD1-207ENST00000551848 1962 ntBASIC14.54□□□□□ -0.08
ABCA1O95477 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
ABCA1O95477 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 AL390961.4-201ENST00000623958 2535 ntBASIC14.54□□□□□ -0.08
ABCA1O95477 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ABCA1O95477 GPR89P-201ENST00000407924 1495 ntBASIC14.54□□□□□ -0.08
ABCA1O95477 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.54□□□□□ -0.08
ABCA1O95477 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
ABCA1O95477 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.54□□□□□ -0.08
ABCA1O95477 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ABCA1O95477 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCA1O95477 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ABCA1O95477 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCA1O95477 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms