Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SOX30O94993 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.19■□□□□ 0.18
SOX30O94993 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SOX30O94993 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX30O94993 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 AC009336.1-201ENST00000608941 1553 ntBASIC16.19■□□□□ 0.18
SOX30O94993 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX30O94993 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.19■□□□□ 0.18
SOX30O94993 KRT16P4-201ENST00000453883 522 ntBASIC16.19■□□□□ 0.18
SOX30O94993 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.19■□□□□ 0.18
SOX30O94993 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.19■□□□□ 0.18
SOX30O94993 AP005901.3-202ENST00000581653 237 ntBASIC16.19■□□□□ 0.18
SOX30O94993 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SOX30O94993 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.19■□□□□ 0.18
SOX30O94993 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX30O94993 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX30O94993 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX30O94993 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SOX30O94993 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX30O94993 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SOX30O94993 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX30O94993 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX30O94993 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX30O94993 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX30O94993 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX30O94993 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX30O94993 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX30O94993 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.18■□□□□ 0.18
SOX30O94993 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.18■□□□□ 0.18
SOX30O94993 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.18■□□□□ 0.18
SOX30O94993 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX30O94993 AC074051.2-201ENST00000565115 352 ntBASIC16.18■□□□□ 0.18
SOX30O94993 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX30O94993 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX30O94993 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX30O94993 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SOX30O94993 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX30O94993 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX30O94993 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.17■□□□□ 0.18
SOX30O94993 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX30O94993 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX30O94993 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX30O94993 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX30O94993 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SOX30O94993 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SOX30O94993 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX30O94993 AL121761.2-201ENST00000598007 1648 ntBASIC16.17■□□□□ 0.18
SOX30O94993 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX30O94993 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX30O94993 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SOX30O94993 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX30O94993 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX30O94993 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX30O94993 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX30O94993 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.17■□□□□ 0.18
SOX30O94993 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.17■□□□□ 0.18
SOX30O94993 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.17■□□□□ 0.18
SOX30O94993 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.17■□□□□ 0.18
SOX30O94993 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.17■□□□□ 0.18
SOX30O94993 BNIP3P18-201ENST00000593976 575 ntBASIC16.17■□□□□ 0.18
SOX30O94993 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SOX30O94993 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.17■□□□□ 0.18
SOX30O94993 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms