Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PMS2P7-201ENST00000506558 1336 ntBASIC16.7■□□□□ 0.26
CPNE3O75131 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE3O75131 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.69■□□□□ 0.26
CPNE3O75131 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.69■□□□□ 0.26
CPNE3O75131 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 SIRPAP1-201ENST00000448467 1770 ntBASIC16.69■□□□□ 0.26
CPNE3O75131 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CPNE3O75131 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CPNE3O75131 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 AL353593.2-201ENST00000602529 1483 ntBASIC16.69■□□□□ 0.26
CPNE3O75131 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE3O75131 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CPNE3O75131 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.69■□□□□ 0.26
CPNE3O75131 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE3O75131 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 KRT18P13-201ENST00000400056 1290 ntBASIC16.69■□□□□ 0.26
CPNE3O75131 AL020989.1-201ENST00000422979 469 ntBASIC16.69■□□□□ 0.26
CPNE3O75131 PRYP5-201ENST00000451909 266 ntBASIC16.69■□□□□ 0.26
CPNE3O75131 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE3O75131 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE3O75131 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CPNE3O75131 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.69■□□□□ 0.26
CPNE3O75131 MIR1199-201ENST00000621445 119 ntBASIC16.69■□□□□ 0.26
CPNE3O75131 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE3O75131 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CPNE3O75131 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE3O75131 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.68■□□□□ 0.26
CPNE3O75131 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.68■□□□□ 0.26
CPNE3O75131 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.68■□□□□ 0.26
CPNE3O75131 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.68■□□□□ 0.26
CPNE3O75131 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.68■□□□□ 0.26
CPNE3O75131 MIR940-201ENST00000401276 94 ntBASIC16.68■□□□□ 0.26
CPNE3O75131 DDX43P3-201ENST00000441064 443 ntBASIC16.68■□□□□ 0.26
CPNE3O75131 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CPNE3O75131 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.68■□□□□ 0.26
CPNE3O75131 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CPNE3O75131 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.68■□□□□ 0.26
CPNE3O75131 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.68■□□□□ 0.26
CPNE3O75131 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CPNE3O75131 Z83851.2-201ENST00000609564 659 ntBASIC16.68■□□□□ 0.26
CPNE3O75131 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.68■□□□□ 0.26
CPNE3O75131 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.68■□□□□ 0.26
CPNE3O75131 BX276092.7-203ENST00000637198 1536 ntBASIC16.68■□□□□ 0.26
CPNE3O75131 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CPNE3O75131 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CPNE3O75131 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.68■□□□□ 0.26
CPNE3O75131 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CPNE3O75131 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE3O75131 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CPNE3O75131 AC084018.2-201ENST00000613093 2607 ntBASIC16.67■□□□□ 0.26
CPNE3O75131 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE3O75131 PCDHA12-202ENST00000613593 2588 ntBASIC16.67■□□□□ 0.26
CPNE3O75131 AC003669.1-201ENST00000334569 611 ntBASIC16.67■□□□□ 0.26
CPNE3O75131 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.67■□□□□ 0.26
CPNE3O75131 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.67■□□□□ 0.26
CPNE3O75131 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.67■□□□□ 0.26
CPNE3O75131 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.67■□□□□ 0.26
CPNE3O75131 RNA5SP415-201ENST00000517246 115 ntBASIC16.67■□□□□ 0.26
CPNE3O75131 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE3O75131 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE3O75131 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 AC027601.4-201ENST00000611259 610 ntBASIC16.67■□□□□ 0.26
CPNE3O75131 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.67■□□□□ 0.26
CPNE3O75131 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms