Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.5■□□□□ 0.07
PFDN1O60925 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.5■□□□□ 0.07
PFDN1O60925 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
PFDN1O60925 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
PFDN1O60925 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.5■□□□□ 0.07
PFDN1O60925 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.5■□□□□ 0.07
PFDN1O60925 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.5■□□□□ 0.07
PFDN1O60925 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PFDN1O60925 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.49■□□□□ 0.07
PFDN1O60925 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 MYLKP1-201ENST00000509077 1580 ntBASIC15.49■□□□□ 0.07
PFDN1O60925 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.49■□□□□ 0.07
PFDN1O60925 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.49■□□□□ 0.07
PFDN1O60925 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.49■□□□□ 0.07
PFDN1O60925 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.49■□□□□ 0.07
PFDN1O60925 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.49■□□□□ 0.07
PFDN1O60925 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PFDN1O60925 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.49■□□□□ 0.07
PFDN1O60925 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 HLA-J-201ENST00000462773 1622 ntBASIC15.49■□□□□ 0.07
PFDN1O60925 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.49■□□□□ 0.07
PFDN1O60925 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
PFDN1O60925 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.49■□□□□ 0.07
PFDN1O60925 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
PFDN1O60925 RCC2P6-201ENST00000526625 1557 ntBASIC15.49■□□□□ 0.07
PFDN1O60925 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.49■□□□□ 0.07
PFDN1O60925 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
PFDN1O60925 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PFDN1O60925 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
PFDN1O60925 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PFDN1O60925 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PFDN1O60925 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.48■□□□□ 0.07
PFDN1O60925 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.48■□□□□ 0.07
PFDN1O60925 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.48■□□□□ 0.07
PFDN1O60925 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.48■□□□□ 0.07
PFDN1O60925 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.48■□□□□ 0.07
PFDN1O60925 BX842568.3-201ENST00000418104 571 ntBASIC15.48■□□□□ 0.07
PFDN1O60925 KRT16P3-201ENST00000439127 1283 ntBASIC15.48■□□□□ 0.07
PFDN1O60925 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.48■□□□□ 0.07
PFDN1O60925 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PFDN1O60925 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms