Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
EDF1O60869 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 HLA-A-202ENST00000376806 1854 ntBASIC17.1■□□□□ 0.33
EDF1O60869 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.1■□□□□ 0.33
EDF1O60869 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
EDF1O60869 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 AC009947.2-201ENST00000444014 672 ntBASIC17.1■□□□□ 0.33
EDF1O60869 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.1■□□□□ 0.33
EDF1O60869 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.1■□□□□ 0.33
EDF1O60869 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.1■□□□□ 0.33
EDF1O60869 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.1■□□□□ 0.33
EDF1O60869 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.1■□□□□ 0.33
EDF1O60869 AC010653.2-201ENST00000623505 997 ntBASIC17.1■□□□□ 0.33
EDF1O60869 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
EDF1O60869 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.1■□□□□ 0.33
EDF1O60869 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.1■□□□□ 0.33
EDF1O60869 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
EDF1O60869 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
EDF1O60869 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.1■□□□□ 0.33
EDF1O60869 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.09■□□□□ 0.33
EDF1O60869 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
EDF1O60869 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EDF1O60869 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.09■□□□□ 0.33
EDF1O60869 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
EDF1O60869 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 ABHD17AP1-201ENST00000358206 933 ntBASIC17.09■□□□□ 0.33
EDF1O60869 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.09■□□□□ 0.33
EDF1O60869 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.09■□□□□ 0.33
EDF1O60869 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EDF1O60869 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.09■□□□□ 0.33
EDF1O60869 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.09■□□□□ 0.33
EDF1O60869 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.09■□□□□ 0.33
EDF1O60869 AC024563.2-201ENST00000603282 481 ntBASIC17.09■□□□□ 0.33
EDF1O60869 AC113410.3-201ENST00000623366 203 ntBASIC17.09■□□□□ 0.33
EDF1O60869 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EDF1O60869 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.09■□□□□ 0.33
EDF1O60869 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.09■□□□□ 0.33
EDF1O60869 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EDF1O60869 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
EDF1O60869 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EDF1O60869 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
EDF1O60869 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
EDF1O60869 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EDF1O60869 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.08■□□□□ 0.33
EDF1O60869 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EDF1O60869 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
EDF1O60869 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EDF1O60869 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EDF1O60869 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.08■□□□□ 0.32
EDF1O60869 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.08■□□□□ 0.32
EDF1O60869 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.08■□□□□ 0.32
EDF1O60869 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.08■□□□□ 0.32
EDF1O60869 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.08■□□□□ 0.32
EDF1O60869 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.08■□□□□ 0.32
EDF1O60869 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.08■□□□□ 0.32
EDF1O60869 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.08■□□□□ 0.32
EDF1O60869 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
EDF1O60869 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EDF1O60869 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms