Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GFRA3O60609 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GFRA3O60609 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GFRA3O60609 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GFRA3O60609 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GFRA3O60609 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.69■□□□□ 0.26
GFRA3O60609 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GFRA3O60609 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GFRA3O60609 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.68■□□□□ 0.26
GFRA3O60609 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GFRA3O60609 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.68■□□□□ 0.26
GFRA3O60609 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GFRA3O60609 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.68■□□□□ 0.26
GFRA3O60609 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GFRA3O60609 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.68■□□□□ 0.26
GFRA3O60609 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.68■□□□□ 0.26
GFRA3O60609 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 AC098799.1-201ENST00000504752 800 ntBASIC16.68■□□□□ 0.26
GFRA3O60609 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.68■□□□□ 0.26
GFRA3O60609 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.68■□□□□ 0.26
GFRA3O60609 DOC2GP-202ENST00000514950 1163 ntBASIC16.68■□□□□ 0.26
GFRA3O60609 MIR3615-201ENST00000581999 87 ntBASIC16.68■□□□□ 0.26
GFRA3O60609 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.68■□□□□ 0.26
GFRA3O60609 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.68■□□□□ 0.26
GFRA3O60609 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GFRA3O60609 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.68■□□□□ 0.26
GFRA3O60609 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.68■□□□□ 0.26
GFRA3O60609 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 TUBB1P2-201ENST00000422712 1306 ntBASIC16.68■□□□□ 0.26
GFRA3O60609 TUBB1P1-201ENST00000503144 1300 ntBASIC16.68■□□□□ 0.26
GFRA3O60609 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
GFRA3O60609 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GFRA3O60609 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GFRA3O60609 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.67■□□□□ 0.26
GFRA3O60609 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GFRA3O60609 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.67■□□□□ 0.26
GFRA3O60609 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GFRA3O60609 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.67■□□□□ 0.26
GFRA3O60609 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.67■□□□□ 0.26
GFRA3O60609 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GFRA3O60609 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.67■□□□□ 0.26
GFRA3O60609 AC107918.2-201ENST00000530817 355 ntBASIC16.67■□□□□ 0.26
GFRA3O60609 AC109635.5-201ENST00000533593 962 ntBASIC16.67■□□□□ 0.26
GFRA3O60609 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC16.67■□□□□ 0.26
GFRA3O60609 AC006213.4-201ENST00000616184 634 ntBASIC16.67■□□□□ 0.26
GFRA3O60609 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
GFRA3O60609 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 GMCL1P1-201ENST00000463439 1581 ntBASIC16.67■□□□□ 0.26
GFRA3O60609 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.67■□□□□ 0.26
GFRA3O60609 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.67■□□□□ 0.26
GFRA3O60609 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GFRA3O60609 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GFRA3O60609 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GFRA3O60609 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
GFRA3O60609 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
GFRA3O60609 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
GFRA3O60609 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
GFRA3O60609 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.66■□□□□ 0.26
GFRA3O60609 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.66■□□□□ 0.26
GFRA3O60609 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.66■□□□□ 0.26
GFRA3O60609 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
GFRA3O60609 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.66■□□□□ 0.26
GFRA3O60609 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
GFRA3O60609 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.66■□□□□ 0.26
GFRA3O60609 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.66■□□□□ 0.26
GFRA3O60609 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GFRA3O60609 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.66■□□□□ 0.26
GFRA3O60609 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
GFRA3O60609 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.66■□□□□ 0.26
GFRA3O60609 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms