Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.47■□□□□ 0.71
ACTN4O43707 AC087388.1-201ENST00000571370 1112 ntBASIC19.47■□□□□ 0.71
ACTN4O43707 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.47■□□□□ 0.71
ACTN4O43707 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 FLJ38576-201ENST00000623820 2459 ntBASIC19.47■□□□□ 0.71
ACTN4O43707 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.47■□□□□ 0.71
ACTN4O43707 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTN4O43707 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ACTN4O43707 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.46■□□□□ 0.71
ACTN4O43707 NSUN5P1-202ENST00000421140 1535 ntBASIC19.46■□□□□ 0.71
ACTN4O43707 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 NSUN5P2-203ENST00000457352 1529 ntBASIC19.46■□□□□ 0.71
ACTN4O43707 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.46■□□□□ 0.71
ACTN4O43707 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.46■□□□□ 0.71
ACTN4O43707 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.46■□□□□ 0.71
ACTN4O43707 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.46■□□□□ 0.71
ACTN4O43707 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.46■□□□□ 0.71
ACTN4O43707 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.46■□□□□ 0.71
ACTN4O43707 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.46■□□□□ 0.71
ACTN4O43707 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.46■□□□□ 0.71
ACTN4O43707 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.46■□□□□ 0.71
ACTN4O43707 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.46■□□□□ 0.71
ACTN4O43707 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
ACTN4O43707 AL590326.2-201ENST00000625139 305 ntBASIC19.46■□□□□ 0.71
ACTN4O43707 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
ACTN4O43707 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ACTN4O43707 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ACTN4O43707 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
ACTN4O43707 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTN4O43707 AC092068.3-201ENST00000587894 2016 ntBASIC19.46■□□□□ 0.71
ACTN4O43707 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
ACTN4O43707 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ACTN4O43707 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ACTN4O43707 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.45■□□□□ 0.7
ACTN4O43707 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 AC003669.1-201ENST00000334569 611 ntBASIC19.45■□□□□ 0.7
ACTN4O43707 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 RCN1P2-201ENST00000398357 915 ntBASIC19.45■□□□□ 0.7
ACTN4O43707 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.45■□□□□ 0.7
ACTN4O43707 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.45■□□□□ 0.7
ACTN4O43707 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.45■□□□□ 0.7
ACTN4O43707 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.45■□□□□ 0.7
ACTN4O43707 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.45■□□□□ 0.7
ACTN4O43707 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ACTN4O43707 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.45■□□□□ 0.7
ACTN4O43707 Z69720.1-201ENST00000601483 472 ntBASIC19.45■□□□□ 0.7
ACTN4O43707 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
ACTN4O43707 NPAP1P7-201ENST00000613027 823 ntBASIC19.45■□□□□ 0.7
ACTN4O43707 AC073592.5-201ENST00000624854 528 ntBASIC19.45■□□□□ 0.7
ACTN4O43707 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.45■□□□□ 0.7
ACTN4O43707 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.45■□□□□ 0.7
ACTN4O43707 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.45■□□□□ 0.7
ACTN4O43707 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ACTN4O43707 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTN4O43707 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ACTN4O43707 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ACTN4O43707 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.44■□□□□ 0.7
ACTN4O43707 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms