Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
MSH5O43196 AP003168.1-201ENST00000530091 307 ntBASIC23.84■■□□□ 1.41
MSH5O43196 AL110292.1-201ENST00000550024 477 ntTSL 3 BASIC23.84■■□□□ 1.41
MSH5O43196 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.84■■□□□ 1.41
MSH5O43196 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MSH5O43196 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.84■■□□□ 1.41
MSH5O43196 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC23.84■■□□□ 1.41
MSH5O43196 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.84■■□□□ 1.41
MSH5O43196 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC23.84■■□□□ 1.41
MSH5O43196 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.84■■□□□ 1.41
MSH5O43196 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
MSH5O43196 AC020763.4-201ENST00000623414 4170 ntBASIC23.84■■□□□ 1.41
MSH5O43196 AL391005.1-201ENST00000623953 2435 ntBASIC23.84■■□□□ 1.41
MSH5O43196 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MSH5O43196 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
MSH5O43196 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
MSH5O43196 NSUN5P1-202ENST00000421140 1535 ntBASIC23.84■■□□□ 1.41
MSH5O43196 NSUN5P2-203ENST00000457352 1529 ntBASIC23.84■■□□□ 1.41
MSH5O43196 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MSH5O43196 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MSH5O43196 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MSH5O43196 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
MSH5O43196 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
MSH5O43196 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MSH5O43196 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
MSH5O43196 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.83■■□□□ 1.41
MSH5O43196 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.83■■□□□ 1.41
MSH5O43196 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC23.83■■□□□ 1.41
MSH5O43196 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.83■■□□□ 1.41
MSH5O43196 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC23.83■■□□□ 1.41
MSH5O43196 BX842568.4-201ENST00000421222 227 ntBASIC23.83■■□□□ 1.41
MSH5O43196 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC23.83■■□□□ 1.41
MSH5O43196 ZRANB2-AS2-205ENST00000455406 783 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MSH5O43196 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC23.83■■□□□ 1.41
MSH5O43196 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC23.83■■□□□ 1.41
MSH5O43196 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MSH5O43196 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.83■■□□□ 1.41
MSH5O43196 AL034374.2-201ENST00000605281 548 ntBASIC23.83■■□□□ 1.41
MSH5O43196 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
MSH5O43196 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC23.83■■□□□ 1.41
MSH5O43196 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MSH5O43196 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
MSH5O43196 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSH5O43196 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.83■■□□□ 1.4
MSH5O43196 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSH5O43196 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSH5O43196 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
MSH5O43196 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSH5O43196 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC23.83■■□□□ 1.4
MSH5O43196 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.83■■□□□ 1.4
MSH5O43196 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSH5O43196 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSH5O43196 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
MSH5O43196 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
MSH5O43196 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
MSH5O43196 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
MSH5O43196 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 KRT18P23-201ENST00000435622 1283 ntBASIC23.82■■□□□ 1.4
MSH5O43196 CISD2-202ENST00000503643 808 ntTSL 2 BASIC23.82■■□□□ 1.4
MSH5O43196 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.82■■□□□ 1.4
MSH5O43196 AC093909.1-201ENST00000504731 1122 ntBASIC23.82■■□□□ 1.4
MSH5O43196 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.82■■□□□ 1.4
MSH5O43196 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.82■■□□□ 1.4
MSH5O43196 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSH5O43196 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.81■■□□□ 1.4
MSH5O43196 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
MSH5O43196 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.81■■□□□ 1.4
MSH5O43196 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
MSH5O43196 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.81■■□□□ 1.4
MSH5O43196 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
MSH5O43196 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC23.81■■□□□ 1.4
MSH5O43196 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 AP001885.1-202ENST00000444002 1255 ntBASIC23.81■■□□□ 1.4
MSH5O43196 MINOS1P3-201ENST00000457048 203 ntBASIC23.81■■□□□ 1.4
MSH5O43196 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MSH5O43196 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC23.81■■□□□ 1.4
MSH5O43196 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
MSH5O43196 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms