Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 IGHV3-52-201ENST00000519770 353 ntBASIC11.53□□□□□ -0.56
RTL8CO15255 DUX4L27-201ENST00000554796 1261 ntBASIC11.53□□□□□ -0.56
RTL8CO15255 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.53□□□□□ -0.56
RTL8CO15255 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.53□□□□□ -0.56
RTL8CO15255 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RTL8CO15255 Z92544.3-201ENST00000624747 417 ntBASIC11.53□□□□□ -0.56
RTL8CO15255 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.53□□□□□ -0.56
RTL8CO15255 AF228730.6-201ENST00000641497 218 ntBASIC11.53□□□□□ -0.56
RTL8CO15255 AC084121.3-201ENST00000641716 218 ntBASIC11.53□□□□□ -0.56
RTL8CO15255 AC105233.6-201ENST00000642093 218 ntBASIC11.53□□□□□ -0.56
RTL8CO15255 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RTL8CO15255 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RTL8CO15255 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
RTL8CO15255 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC11.53□□□□□ -0.56
RTL8CO15255 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.53□□□□□ -0.56
RTL8CO15255 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC11.53□□□□□ -0.56
RTL8CO15255 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.53□□□□□ -0.56
RTL8CO15255 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
RTL8CO15255 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC11.53□□□□□ -0.56
RTL8CO15255 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC11.53□□□□□ -0.56
RTL8CO15255 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RTL8CO15255 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RTL8CO15255 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC11.53□□□□□ -0.56
RTL8CO15255 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
RTL8CO15255 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RTL8CO15255 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RTL8CO15255 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RTL8CO15255 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC11.52□□□□□ -0.56
RTL8CO15255 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
RTL8CO15255 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RTL8CO15255 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RTL8CO15255 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RTL8CO15255 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RTL8CO15255 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RTL8CO15255 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
RTL8CO15255 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RTL8CO15255 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RTL8CO15255 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
RTL8CO15255 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
RTL8CO15255 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.52□□□□□ -0.57
RTL8CO15255 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
RTL8CO15255 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 PMS2P4-201ENST00000412466 1052 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 AL627223.1-201ENST00000416693 442 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
RTL8CO15255 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.52□□□□□ -0.57
RTL8CO15255 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.52□□□□□ -0.57
RTL8CO15255 FAM185BP-201ENST00000443595 716 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RTL8CO15255 TIMM8BP1-201ENST00000452384 211 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.52□□□□□ -0.57
RTL8CO15255 RNA5SP421-201ENST00000516864 134 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 AC112191.1-201ENST00000523689 701 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.52□□□□□ -0.57
RTL8CO15255 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.52□□□□□ -0.57
RTL8CO15255 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.52□□□□□ -0.57
RTL8CO15255 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.52□□□□□ -0.57
RTL8CO15255 AC015911.4-201ENST00000588022 1070 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.52□□□□□ -0.57
RTL8CO15255 AC116407.2-201ENST00000613639 860 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 AC009093.7-201ENST00000623853 1223 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.52□□□□□ -0.57
RTL8CO15255 USP49-202ENST00000373010 2446 ntTSL 5 BASIC11.52□□□□□ -0.57
RTL8CO15255 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
RTL8CO15255 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 CROCCP1-201ENST00000426910 5675 ntBASIC11.52□□□□□ -0.57
RTL8CO15255 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
RTL8CO15255 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
RTL8CO15255 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RTL8CO15255 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RTL8CO15255 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
RTL8CO15255 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC11.52□□□□□ -0.57
RTL8CO15255 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
RTL8CO15255 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RTL8CO15255 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.52□□□□□ -0.57
RTL8CO15255 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.52□□□□□ -0.57
RTL8CO15255 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms