Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.52■□□□□ 0.24
CASQ2O14958 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.52■□□□□ 0.24
CASQ2O14958 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CASQ2O14958 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.52■□□□□ 0.24
CASQ2O14958 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.52■□□□□ 0.24
CASQ2O14958 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 AC023824.1-201ENST00000562945 2975 ntBASIC16.52■□□□□ 0.24
CASQ2O14958 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.52■□□□□ 0.24
CASQ2O14958 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CASQ2O14958 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CASQ2O14958 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CASQ2O14958 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.52■□□□□ 0.24
CASQ2O14958 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.52■□□□□ 0.24
CASQ2O14958 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.52■□□□□ 0.24
CASQ2O14958 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.52■□□□□ 0.24
CASQ2O14958 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CASQ2O14958 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CASQ2O14958 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 KRT8P7-201ENST00000533003 1432 ntBASIC16.52■□□□□ 0.23
CASQ2O14958 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.52■□□□□ 0.23
CASQ2O14958 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CASQ2O14958 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.51■□□□□ 0.23
CASQ2O14958 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CASQ2O14958 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.51■□□□□ 0.23
CASQ2O14958 SBF1P1-201ENST00000444527 5631 ntBASIC16.51■□□□□ 0.23
CASQ2O14958 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CASQ2O14958 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.51■□□□□ 0.23
CASQ2O14958 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.51■□□□□ 0.23
CASQ2O14958 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 AC009065.1-201ENST00000564055 1225 ntBASIC16.51■□□□□ 0.23
CASQ2O14958 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.51■□□□□ 0.23
CASQ2O14958 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.51■□□□□ 0.23
CASQ2O14958 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CASQ2O14958 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.51■□□□□ 0.23
CASQ2O14958 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CASQ2O14958 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.51■□□□□ 0.23
CASQ2O14958 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CASQ2O14958 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.51■□□□□ 0.23
CASQ2O14958 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.51■□□□□ 0.23
CASQ2O14958 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASQ2O14958 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.5■□□□□ 0.23
CASQ2O14958 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.5■□□□□ 0.23
CASQ2O14958 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.5■□□□□ 0.23
CASQ2O14958 AC092384.3-202ENST00000564646 2873 ntBASIC16.5■□□□□ 0.23
CASQ2O14958 AL161772.1-201ENST00000610494 4412 ntBASIC16.5■□□□□ 0.23
CASQ2O14958 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.5■□□□□ 0.23
CASQ2O14958 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
CASQ2O14958 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.5■□□□□ 0.23
CASQ2O14958 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CASQ2O14958 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.5■□□□□ 0.23
CASQ2O14958 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms